Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.74■■□□□ 1.07
PTPN20Q4JDL3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.74■■□□□ 1.07
PTPN20Q4JDL3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.74■■□□□ 1.07
PTPN20Q4JDL3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN20Q4JDL3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN20Q4JDL3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.73■■□□□ 1.07
PTPN20Q4JDL3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN20Q4JDL3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.73■■□□□ 1.07
PTPN20Q4JDL3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN20Q4JDL3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
PTPN20Q4JDL3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN20Q4JDL3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN20Q4JDL3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN20Q4JDL3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN20Q4JDL3 AC007322.4-201ENST00000509611 723 ntBASIC21.73■■□□□ 1.07
PTPN20Q4JDL3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN20Q4JDL3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN20Q4JDL3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PTPN20Q4JDL3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN20Q4JDL3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN20Q4JDL3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN20Q4JDL3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN20Q4JDL3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PTPN20Q4JDL3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PTPN20Q4JDL3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN20Q4JDL3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN20Q4JDL3 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.73■■□□□ 1.07
PTPN20Q4JDL3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.72■■□□□ 1.07
PTPN20Q4JDL3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.72■■□□□ 1.07
PTPN20Q4JDL3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN20Q4JDL3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.72■■□□□ 1.07
PTPN20Q4JDL3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN20Q4JDL3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PTPN20Q4JDL3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN20Q4JDL3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN20Q4JDL3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN20Q4JDL3 AC007322.3-201ENST00000426526 701 ntBASIC21.72■■□□□ 1.07
PTPN20Q4JDL3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN20Q4JDL3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.72■■□□□ 1.07
PTPN20Q4JDL3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PTPN20Q4JDL3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.72■■□□□ 1.07
PTPN20Q4JDL3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PTPN20Q4JDL3 AL157384.1-201ENST00000445995 2473 ntBASIC21.72■■□□□ 1.07
PTPN20Q4JDL3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN20Q4JDL3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN20Q4JDL3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN20Q4JDL3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN20Q4JDL3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN20Q4JDL3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN20Q4JDL3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN20Q4JDL3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN20Q4JDL3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN20Q4JDL3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN20Q4JDL3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN20Q4JDL3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.71■■□□□ 1.07
PTPN20Q4JDL3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PTPN20Q4JDL3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN20Q4JDL3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN20Q4JDL3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PTPN20Q4JDL3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.71■■□□□ 1.07
PTPN20Q4JDL3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.71■■□□□ 1.07
PTPN20Q4JDL3 AC027702.1-201ENST00000563810 1770 ntBASIC21.71■■□□□ 1.07
PTPN20Q4JDL3 AC007225.1-201ENST00000566331 1836 ntBASIC21.71■■□□□ 1.07
PTPN20Q4JDL3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN20Q4JDL3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.71■■□□□ 1.07
PTPN20Q4JDL3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN20Q4JDL3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
PTPN20Q4JDL3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN20Q4JDL3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN20Q4JDL3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PTPN20Q4JDL3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN20Q4JDL3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN20Q4JDL3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN20Q4JDL3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN20Q4JDL3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.7■■□□□ 1.06
PTPN20Q4JDL3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
PTPN20Q4JDL3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.7■■□□□ 1.06
PTPN20Q4JDL3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.7■■□□□ 1.06
PTPN20Q4JDL3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
PTPN20Q4JDL3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.7■■□□□ 1.06
PTPN20Q4JDL3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.7■■□□□ 1.06
PTPN20Q4JDL3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PTPN20Q4JDL3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN20Q4JDL3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN20Q4JDL3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 FP700111.2-201ENST00000619190 1892 ntBASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 AC004911.1-201ENST00000416316 871 ntBASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 AL591742.1-201ENST00000604433 565 ntBASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 AC016405.3-201ENST00000607710 860 ntBASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms