Protein–RNA interactions for Protein: Q08623

PUDP, Pseudouridine-5'-phosphatase, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPQ08623 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.72■□□□□ 0.59
PUDPQ08623 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.72■□□□□ 0.59
PUDPQ08623 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.72■□□□□ 0.59
PUDPQ08623 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PUDPQ08623 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PUDPQ08623 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PUDPQ08623 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PUDPQ08623 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PUDPQ08623 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PUDPQ08623 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.72■□□□□ 0.59
PUDPQ08623 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.72■□□□□ 0.59
PUDPQ08623 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PUDPQ08623 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PUDPQ08623 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PUDPQ08623 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PUDPQ08623 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PUDPQ08623 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.71■□□□□ 0.59
PUDPQ08623 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PUDPQ08623 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.71■□□□□ 0.59
PUDPQ08623 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.71■□□□□ 0.59
PUDPQ08623 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PUDPQ08623 AC010141.2-201ENST00000452426 721 ntBASIC18.71■□□□□ 0.59
PUDPQ08623 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PUDPQ08623 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.71■□□□□ 0.59
PUDPQ08623 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.71■□□□□ 0.59
PUDPQ08623 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.71■□□□□ 0.59
PUDPQ08623 AC104187.1-201ENST00000607510 612 ntBASIC18.71■□□□□ 0.59
PUDPQ08623 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.71■□□□□ 0.59
PUDPQ08623 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PUDPQ08623 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PUDPQ08623 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.71■□□□□ 0.59
PUDPQ08623 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PUDPQ08623 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PUDPQ08623 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
PUDPQ08623 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
PUDPQ08623 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PUDPQ08623 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.7■□□□□ 0.58
PUDPQ08623 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PUDPQ08623 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.7■□□□□ 0.58
PUDPQ08623 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
PUDPQ08623 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PUDPQ08623 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PUDPQ08623 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.7■□□□□ 0.58
PUDPQ08623 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
PUDPQ08623 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.7■□□□□ 0.58
PUDPQ08623 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PUDPQ08623 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PUDPQ08623 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.7■□□□□ 0.58
PUDPQ08623 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.7■□□□□ 0.58
PUDPQ08623 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.7■□□□□ 0.58
PUDPQ08623 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.7■□□□□ 0.58
PUDPQ08623 DUX4L2-201ENST00000561772 1275 ntBASIC18.7■□□□□ 0.58
PUDPQ08623 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.7■□□□□ 0.58
PUDPQ08623 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PUDPQ08623 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.7■□□□□ 0.58
PUDPQ08623 DUX4L6-201ENST00000626483 1275 ntBASIC18.7■□□□□ 0.58
PUDPQ08623 DUX4L1-201ENST00000627662 1275 ntBASIC18.7■□□□□ 0.58
PUDPQ08623 DUX4L8-201ENST00000629013 1275 ntBASIC18.7■□□□□ 0.58
PUDPQ08623 DUX4L3-201ENST00000630187 1275 ntBASIC18.7■□□□□ 0.58
PUDPQ08623 DUX4L7-201ENST00000630678 1275 ntBASIC18.7■□□□□ 0.58
PUDPQ08623 DUX4L5-201ENST00000630834 1275 ntBASIC18.7■□□□□ 0.58
PUDPQ08623 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PUDPQ08623 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PUDPQ08623 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PUDPQ08623 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PUDPQ08623 AC007952.6-201ENST00000573168 2673 ntBASIC18.69■□□□□ 0.58
PUDPQ08623 AC003957.1-201ENST00000625108 2673 ntBASIC18.69■□□□□ 0.58
PUDPQ08623 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PUDPQ08623 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PUDPQ08623 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.69■□□□□ 0.58
PUDPQ08623 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PUDPQ08623 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PUDPQ08623 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PUDPQ08623 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PUDPQ08623 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.69■□□□□ 0.58
PUDPQ08623 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PUDPQ08623 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PUDPQ08623 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PUDPQ08623 AC120498.10-201ENST00000621827 505 ntBASIC18.69■□□□□ 0.58
PUDPQ08623 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.69■□□□□ 0.58
PUDPQ08623 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PUDPQ08623 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PUDPQ08623 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PUDPQ08623 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PUDPQ08623 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PUDPQ08623 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PUDPQ08623 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PUDPQ08623 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.68■□□□□ 0.58
PUDPQ08623 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.68■□□□□ 0.58
PUDPQ08623 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PUDPQ08623 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PUDPQ08623 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PUDPQ08623 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PUDPQ08623 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PUDPQ08623 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PUDPQ08623 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.68■□□□□ 0.58
PUDPQ08623 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.68■□□□□ 0.58
PUDPQ08623 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
PUDPQ08623 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PUDPQ08623 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms