Protein–RNA interactions for Protein: Q07953

SDO1, Ribosome maturation protein SDO1, yeastyeast

Known RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDO1Q07953 YJL070CYJL070C 2667 nt1.97□□□□□ -2.09
SDO1Q07953 HSE1YHL002W 1359 nt1.97□□□□□ -2.09
SDO1Q07953 SCP160YJL080C 3669 nt1.96□□□□□ -2.1
SDO1Q07953 MSB1YOR188W 3414 nt1.96□□□□□ -2.1
SDO1Q07953 YCR099CYCR099C 468 nt1.96□□□□□ -2.1
SDO1Q07953 OST5YGL226C-A 261 nt1.96□□□□□ -2.1
SDO1Q07953 AYR1YIL124W 894 nt1.96□□□□□ -2.1
SDO1Q07953 SMD2YLR275W 333 nt1.96□□□□□ -2.1
SDO1Q07953 VTI1YMR197C 654 nt1.96□□□□□ -2.1
SDO1Q07953 CAT5YOR125C 702 nt1.96□□□□□ -2.1
SDO1Q07953 PEX27YOR193W 1131 nt1.96□□□□□ -2.1
SDO1Q07953 AME1YBR211C 975 nt1.96□□□□□ -2.1
SDO1Q07953 SMC6YLR383W 3345 nt1.95□□□□□ -2.1
SDO1Q07953 ATP16YDL004W 483 nt1.95□□□□□ -2.1
SDO1Q07953 YDR193WYDR193W 399 nt1.95□□□□□ -2.1
SDO1Q07953 SRB7YDR308C 423 nt1.95□□□□□ -2.1
SDO1Q07953 EST3YIL009C-A 546 nt1.95□□□□□ -2.1
SDO1Q07953 YJL156W-AYJL156W-A 222 nt1.95□□□□□ -2.1
SDO1Q07953 RFA3YJL173C 369 nt1.95□□□□□ -2.1
SDO1Q07953 VPS51YKR020W 495 nt1.95□□□□□ -2.1
SDO1Q07953 RPS30AYLR287C-A 192 nt1.95□□□□□ -2.1
SDO1Q07953 MIX23YBL107C 591 nt1.95□□□□□ -2.1
SDO1Q07953 TRM7YBR061C 933 nt1.95□□□□□ -2.1
SDO1Q07953 CUR1YPR158W 759 nt1.95□□□□□ -2.1
SDO1Q07953 PDR11YIL013C 4236 nt1.95□□□□□ -2.1
SDO1Q07953 RRP6YOR001W 2202 nt1.95□□□□□ -2.1
SDO1Q07953 PSO2YMR137C 1986 nt1.94□□□□□ -2.1
SDO1Q07953 RAV2YDR202C 1056 nt1.94□□□□□ -2.1
SDO1Q07953 YHR032W-AYHR032W-A 180 nt1.94□□□□□ -2.1
SDO1Q07953 TPK3YKL166C 1197 nt1.94□□□□□ -2.1
SDO1Q07953 COX14YML129C 213 nt1.94□□□□□ -2.1
SDO1Q07953 YMR144WYMR144W 1029 nt1.94□□□□□ -2.1
SDO1Q07953 YMR306C-AYMR306C-A 390 nt1.94□□□□□ -2.1
SDO1Q07953 CIN2YPL241C 807 nt1.94□□□□□ -2.1
SDO1Q07953 UBS1YBR165W 834 nt1.94□□□□□ -2.1
SDO1Q07953 SPT14YPL175W 1359 nt1.94□□□□□ -2.1
SDO1Q07953 SIR4YDR227W 4077 nt1.93□□□□□ -2.1
SDO1Q07953 MPC1YGL080W 393 nt1.93□□□□□ -2.1
SDO1Q07953 BTN2YGR142W 1233 nt1.93□□□□□ -2.1
SDO1Q07953 PEX18YHR160C 852 nt1.93□□□□□ -2.1
SDO1Q07953 YKR051WYKR051W 1257 nt1.93□□□□□ -2.1
SDO1Q07953 YLR379WYLR379W 375 nt1.93□□□□□ -2.1
SDO1Q07953 MTG1YMR097C 1104 nt1.93□□□□□ -2.1
SDO1Q07953 CTF13YMR094W 1437 nt1.92□□□□□ -2.1
SDO1Q07953 CDC37YDR168W 1521 nt1.92□□□□□ -2.1
SDO1Q07953 INO80YGL150C 4470 nt1.92□□□□□ -2.1
SDO1Q07953 PRP38YGR075C 729 nt1.92□□□□□ -2.1
SDO1Q07953 CUP1-1YHR053C 186 nt1.92□□□□□ -2.1
SDO1Q07953 CUP1-2YHR055C 186 nt1.92□□□□□ -2.1
SDO1Q07953 RMP1YLR145W 606 nt1.92□□□□□ -2.1
SDO1Q07953 DGR1YNL130C-A 147 nt1.92□□□□□ -2.1
SDO1Q07953 YOL085W-AYOL085W-A 213 nt1.92□□□□□ -2.1
SDO1Q07953 SSF1YHR066W 1362 nt1.92□□□□□ -2.1
SDO1Q07953 TFC3YAL001C 3483 nt1.92□□□□□ -2.1
SDO1Q07953 VPH1YOR270C 2523 nt1.91□□□□□ -2.1
SDO1Q07953 LST4YKL176C 2487 nt1.91□□□□□ -2.1
SDO1Q07953 IPT1YDR072C 1584 nt1.91□□□□□ -2.1
SDO1Q07953 RAD18YCR066W 1464 nt1.91□□□□□ -2.1
SDO1Q07953 SPP41YDR464W 4308 nt1.91□□□□□ -2.1
SDO1Q07953 NSE4YDL105W 1209 nt1.91□□□□□ -2.1
SDO1Q07953 GPI14YJR013W 1212 nt1.91□□□□□ -2.1
SDO1Q07953 COA4YLR218C 453 nt1.91□□□□□ -2.1
SDO1Q07953 COX8YLR395C 237 nt1.91□□□□□ -2.1
SDO1Q07953 PRK1YIL095W 2433 nt1.91□□□□□ -2.1
SDO1Q07953 SKP2YNL311C 2292 nt1.91□□□□□ -2.1
SDO1Q07953 RTT101YJL047C 2529 nt1.9□□□□□ -2.1
SDO1Q07953 GET1YGL020C 708 nt1.9□□□□□ -2.11
SDO1Q07953 THG1YGR024C 714 nt1.9□□□□□ -2.11
SDO1Q07953 YGR226CYGR226C 210 nt1.9□□□□□ -2.11
SDO1Q07953 GIM5YML094W 492 nt1.9□□□□□ -2.11
SDO1Q07953 YPL276WYPL276W 438 nt1.9□□□□□ -2.11
SDO1Q07953 VID24YBR105C 1089 nt1.9□□□□□ -2.11
SDO1Q07953 VPS8YAL002W 3825 nt1.9□□□□□ -2.11
SDO1Q07953 MGM1YOR211C 2646 nt1.89□□□□□ -2.11
SDO1Q07953 tC(GCA)BtC(GCA)B 72 nt1.89□□□□□ -2.11
SDO1Q07953 tC(GCA)GtC(GCA)G 72 nt1.89□□□□□ -2.11
SDO1Q07953 tC(GCA)P1tC(GCA)P1 72 nt1.89□□□□□ -2.11
SDO1Q07953 tC(GCA)P2tC(GCA)P2 72 nt1.89□□□□□ -2.11
SDO1Q07953 PRE1YER012W 597 nt1.89□□□□□ -2.11
SDO1Q07953 YPS5YGL259W 498 nt1.89□□□□□ -2.11
SDO1Q07953 YHR071C-AYHR071C-A 321 nt1.89□□□□□ -2.11
SDO1Q07953 LSM12YHR121W 564 nt1.89□□□□□ -2.11
SDO1Q07953 tW(CCA)G1tW(CCA)G1 72 nt1.89□□□□□ -2.11
SDO1Q07953 tW(CCA)G2tW(CCA)G2 72 nt1.89□□□□□ -2.11
SDO1Q07953 tW(CCA)JtW(CCA)J 72 nt1.89□□□□□ -2.11
SDO1Q07953 tW(CCA)KtW(CCA)K 72 nt1.89□□□□□ -2.11
SDO1Q07953 tW(CCA)MtW(CCA)M 72 nt1.89□□□□□ -2.11
SDO1Q07953 tW(CCA)PtW(CCA)P 72 nt1.89□□□□□ -2.11
SDO1Q07953 YJL052C-AYJL052C-A 120 nt1.89□□□□□ -2.11
SDO1Q07953 SRL4YPL033C 846 nt1.89□□□□□ -2.11
SDO1Q07953 YBR051WYBR051W 351 nt1.89□□□□□ -2.11
SDO1Q07953 ARL1YBR164C 552 nt1.89□□□□□ -2.11
SDO1Q07953 GCN2YDR283C 4980 nt1.89□□□□□ -2.11
SDO1Q07953 ATG9YDL149W 2994 nt1.89□□□□□ -2.11
SDO1Q07953 TRL1YJL087C 2484 nt1.89□□□□□ -2.11
SDO1Q07953 RUD3YOR216C 1455 nt1.88□□□□□ -2.11
SDO1Q07953 PDR8YLR266C 2106 nt1.88□□□□□ -2.11
SDO1Q07953 SCH9YHR205W 2475 nt1.88□□□□□ -2.11
SDO1Q07953 PIB1YDR313C 861 nt1.88□□□□□ -2.11
SDO1Q07953 RMD6YEL072W 696 nt1.88□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 14.9 ms