Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 ACADM-209ENST00000526196 1451 ntTSL 1 (best)7.91□□□□□ -1.142e-6■■■□□ 15.4
LSM11P83369 SLC9A6-207ENST00000636092 4697 ntTSL 5 BASIC7.87□□□□□ -1.152e-6■■■□□ 15.4
LSM11P83369 SAT2-203ENST00000570850 685 ntTSL 37.83□□□□□ -1.162e-7■■■□□ 15.4
LSM11P83369 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC7.8□□□□□ -1.162e-6■■■□□ 15.4
LSM11P83369 YY1AP1-203ENST00000347088 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.172e-6■■■□□ 15.4
LSM11P83369 SAT2-204ENST00000570914 765 ntTSL 27.73□□□□□ -1.172e-7■■■□□ 15.4
LSM11P83369 WARS-227ENST00000556295 517 ntTSL 37.68□□□□□ -1.182e-6■■■□□ 15.4
LSM11P83369 WARS-240ENST00000557297 821 ntTSL 37.31□□□□□ -1.242e-6■■■□□ 15.4
LSM11P83369 NPEPPS-205ENST00000525048 534 ntTSL 37.3□□□□□ -1.241e-11■■■□□ 15.4
LSM11P83369 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC7.28□□□□□ -1.241e-11■■■□□ 15.4
LSM11P83369 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.274e-43■■■□□ 15.4
LSM11P83369 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC7.06□□□□□ -1.282e-6■■■□□ 15.4
LSM11P83369 ZNF267-203ENST00000561814 563 ntTSL 46.92□□□□□ -1.32e-6■■■□□ 15.4
LSM11P83369 WARS-226ENST00000556209 564 ntTSL 46.88□□□□□ -1.312e-6■■■□□ 15.4
LSM11P83369 SLMAP-214ENST00000467901 2698 ntTSL 26.85□□□□□ -1.316e-9■■■□□ 15.4
LSM11P83369 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.361e-11■■■□□ 15.4
LSM11P83369 WARS-219ENST00000554820 538 ntTSL 46.32□□□□□ -1.42e-6■■■□□ 15.4
LSM11P83369 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC6.26□□□□□ -1.412e-6■■■□□ 15.4
LSM11P83369 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.426e-9■■■□□ 15.4
LSM11P83369 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC6.19□□□□□ -1.422e-6■■■□□ 15.4
LSM11P83369 ZFPM2-208ENST00000522160 468 ntTSL 36.17□□□□□ -1.422e-6■■■□□ 15.4
LSM11P83369 HACE1-206ENST00000517995 2809 ntTSL 1 (best)6.01□□□□□ -1.452e-6■■■□□ 15.4
LSM11P83369 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.01□□□□□ -1.454e-43■■■□□ 15.4
LSM11P83369 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.91□□□□□ -1.461e-11■■■□□ 15.4
LSM11P83369 WARS-223ENST00000555410 677 ntTSL 55.87□□□□□ -1.472e-6■■■□□ 15.4
LSM11P83369 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.484e-43■■■□□ 15.4
LSM11P83369 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.83□□□□□ -1.482e-6■■■□□ 15.4
LSM11P83369 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.8□□□□□ -1.484e-43■■■□□ 15.4
LSM11P83369 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.482e-6■■■□□ 15.4
LSM11P83369 WARS-237ENST00000557094 582 ntTSL 25.77□□□□□ -1.492e-6■■■□□ 15.4
LSM11P83369 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.7□□□□□ -1.52e-6■■■□□ 15.4
LSM11P83369 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.29□□□□□ -1.566e-9■■■□□ 15.4
LSM11P83369 WARS-225ENST00000555813 410 ntTSL 45.24□□□□□ -1.572e-6■■■□□ 15.4
LSM11P83369 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.55□□□□□ -1.686e-9■■■□□ 15.4
LSM11P83369 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.682e-6■■■□□ 15.4
LSM11P83369 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.782e-6■■■□□ 15.4
LSM11P83369 HACE1-203ENST00000369127 5318 ntTSL 1 (best)3.19□□□□□ -1.92e-6■■■□□ 15.4
LSM11P83369 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.481e-10■■■□□ 15.4
LSM11P83369 UNC13D-202ENST00000412096 3648 ntTSL 2 BASIC11.84□□□□□ -0.511e-10■■■□□ 15.4
LSM11P83369 ANO9-206ENST00000528927 2639 ntTSL 1 (best)15.46■□□□□ 0.076e-7■■■□□ 15.4
LSM11P83369 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.266e-7■■■□□ 15.4
LSM11P83369 RECQL4-201ENST00000301323 781 ntTSL 314.23□□□□□ -0.135e-7■■■□□ 15.4
LSM11P83369 RECQL4-203ENST00000529424 324 ntTSL 29.85□□□□□ -0.831e-8■■■□□ 15.4
LSM11P83369 GOLGA8A-203ENST00000473125 6233 ntTSL 1 (best)9.68□□□□□ -0.862e-8■■■□□ 15.4
LSM11P83369 GOLGA8A-202ENST00000432566 4577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.92e-8■■■□□ 15.4
LSM11P83369 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.64■□□□□ 0.734e-7■■■□□ 15.4
LSM11P83369 AL591895.1-201ENST00000424332 348 ntTSL 3 BASIC9.4□□□□□ -0.92e-12■■■□□ 15.4
LSM11P83369 WDR62-205ENST00000587391 5971 ntTSL 1 (best)13.7□□□□□ -0.222e-6■■■□□ 15.4
LSM11P83369 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.552e-6■■■□□ 15.4
LSM11P83369 WDR62-201ENST00000270301 4632 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.682e-6■■■□□ 15.4
LSM11P83369 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.72■□□□□ 0.114e-8■■■□□ 15.4
LSM11P83369 ASB16-AS1-205ENST00000618557 1328 nt14.92□□□□□ -0.024e-8■■■□□ 15.4
LSM11P83369 ASB16-AS1-203ENST00000591166 754 ntTSL 38.78□□□□□ -14e-8■■■□□ 15.4
LSM11P83369 ASB16-AS1-202ENST00000588785 574 ntTSL 36.83□□□□□ -1.324e-8■■■□□ 15.4
LSM11P83369 C22orf34-202ENST00000400023 1469 ntTSL 1 (best)13.93□□□□□ -0.184e-7■■■□□ 15.3
LSM11P83369 DAZAP1-208ENST00000589874 3642 nt12.96□□□□□ -0.347e-7■■■□□ 15.3
LSM11P83369 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.15■■□□□ 1.32e-7■■■□□ 15.3
LSM11P83369 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.082e-7■■■□□ 15.3
LSM11P83369 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 12e-7■■■□□ 15.3
LSM11P83369 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.862e-7■■■□□ 15.3
LSM11P83369 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.6■□□□□ 0.733e-8■■■□□ 15.3
LSM11P83369 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.543e-8■■■□□ 15.3
LSM11P83369 ACADVL-201ENST00000322910 2352 ntTSL 217.31■□□□□ 0.363e-8■■■□□ 15.3
LSM11P83369 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.79■□□□□ 0.283e-8■■■□□ 15.3
LSM11P83369 ACADVL-237ENST00000583858 1015 ntTSL 516.43■□□□□ 0.223e-8■■■□□ 15.3
LSM11P83369 ACADVL-232ENST00000583074 410 ntTSL 516.21■□□□□ 0.192e-9■■■□□ 15.3
LSM11P83369 ACADVL-236ENST00000583850 903 ntTSL 216.12■□□□□ 0.171e-9■■■□□ 15.3
LSM11P83369 ACADVL-220ENST00000579546 582 ntTSL 515.56■□□□□ 0.081e-9■■■□□ 15.3
LSM11P83369 ACADVL-214ENST00000578711 1732 nt15.11■□□□□ 0.011e-9■■■□□ 15.3
LSM11P83369 ACADVL-204ENST00000542255 1016 ntTSL 514.76□□□□□ -0.051e-9■■■□□ 15.3
LSM11P83369 ACADVL-219ENST00000579425 1234 ntTSL 513.05□□□□□ -0.321e-9■■■□□ 15.3
LSM11P83369 ACADVL-239ENST00000585203 947 ntTSL 513.05□□□□□ -0.324e-8■■■□□ 15.3
LSM11P83369 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.33■□□□□ 0.681e-7■■■□□ 15.3
LSM11P83369 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.13■□□□□ 0.651e-9■■■□□ 15.3
LSM11P83369 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.631e-9■■■□□ 15.3
LSM11P83369 CYHR1-212ENST00000533764 853 ntTSL 218.83■□□□□ 0.61e-7■■■□□ 15.3
LSM11P83369 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.41■□□□□ 0.381e-7■■■□□ 15.3
LSM11P83369 CENPX-211ENST00000585091 739 ntTSL 317.32■□□□□ 0.361e-7■■■□□ 15.3
LSM11P83369 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.131e-7■■■□□ 15.3
LSM11P83369 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.63■□□□□ 0.091e-7■■■□□ 15.3
LSM11P83369 MIR4321-201ENST00000592276 80 ntBASIC14.71□□□□□ -0.051e-7■■■□□ 15.3
LSM11P83369 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.51□□□□□ -0.251e-7■■■□□ 15.3
LSM11P83369 CYHR1-208ENST00000528663 5821 ntTSL 1 (best)13.12□□□□□ -0.311e-7■■■□□ 15.3
LSM11P83369 CYHR1-211ENST00000533173 6158 ntTSL 1 (best)12.97□□□□□ -0.331e-7■■■□□ 15.3
LSM11P83369 SRSF7-203ENST00000415527 1135 ntTSL 512.57□□□□□ -0.41e-7■■■□□ 15.3
LSM11P83369 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC11.83□□□□□ -0.521e-7■■■□□ 15.3
LSM11P83369 NOP16-207ENST00000614830 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.671e-7■■■□□ 15.3
LSM11P83369 NOP16-210ENST00000619979 963 ntTSL 5 BASIC10.58□□□□□ -0.721e-7■■■□□ 15.3
LSM11P83369 NOP16-202ENST00000502663 551 ntTSL 310.58□□□□□ -0.721e-7■■■□□ 15.3
LSM11P83369 TMEM63A-201ENST00000366835 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.761e-7■■■□□ 15.3
LSM11P83369 AL031847.1-201ENST00000455744 378 ntTSL 3 BASIC10.09□□□□□ -0.791e-7■■■□□ 15.3
LSM11P83369 NOP16-208ENST00000616685 472 ntTSL 3 BASIC9.03□□□□□ -0.961e-7■■■□□ 15.3
LSM11P83369 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.54□□□□□ -21e-7■■■□□ 15.3
LSM11P83369 EPS8L2-228ENST00000534679 750 ntTSL 216.25■□□□□ 0.194e-10■■■□□ 15.3
LSM11P83369 POLE-220ENST00000544692 2221 ntTSL 520.01■□□□□ 0.792e-6■■■□□ 15.3
LSM11P83369 POLE-206ENST00000534922 1660 ntTSL 317.57■□□□□ 0.42e-6■■■□□ 15.3
LSM11P83369 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.712e-6■■■□□ 15.3
LSM11P83369 ACADVL-218ENST00000579391 341 ntTSL 214.07□□□□□ -0.161e-9■■■□□ 15.3
LSM11P83369 EPS8L2-226ENST00000534027 342 ntTSL 213.79□□□□□ -0.24e-10■■■□□ 15.3
LSM11P83369 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.361e-11■■■□□ 15.2
Retrieved 100 of 11,495 protein–RNA pairs in 69.9 ms