Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HIST1H3AP68431 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.03■□□□□ 0.48
HIST1H3AP68431 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.03■□□□□ 0.48
HIST1H3AP68431 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.03■□□□□ 0.48
HIST1H3AP68431 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.03■□□□□ 0.48
HIST1H3AP68431 UBE2DNL-204ENST00000602536 740 ntBASIC18.03■□□□□ 0.48
HIST1H3AP68431 AC116050.2-201ENST00000612102 1779 ntBASIC18.03■□□□□ 0.48
HIST1H3AP68431 LINC01521-201ENST00000504184 1943 ntBASIC18.03■□□□□ 0.48
HIST1H3AP68431 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HIST1H3AP68431 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.03■□□□□ 0.48
HIST1H3AP68431 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIST1H3AP68431 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.03■□□□□ 0.48
HIST1H3AP68431 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIST1H3AP68431 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HIST1H3AP68431 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIST1H3AP68431 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.02■□□□□ 0.48
HIST1H3AP68431 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HIST1H3AP68431 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
HIST1H3AP68431 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.02■□□□□ 0.48
HIST1H3AP68431 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HIST1H3AP68431 AC027702.1-201ENST00000563810 1770 ntBASIC18.02■□□□□ 0.48
HIST1H3AP68431 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HIST1H3AP68431 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
HIST1H3AP68431 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
HIST1H3AP68431 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.02■□□□□ 0.48
HIST1H3AP68431 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HIST1H3AP68431 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HIST1H3AP68431 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.02■□□□□ 0.48
HIST1H3AP68431 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.02■□□□□ 0.48
HIST1H3AP68431 GABARAPL3-202ENST00000624044 1851 ntBASIC18.02■□□□□ 0.48
HIST1H3AP68431 AP005212.1-201ENST00000581547 1997 ntBASIC18.02■□□□□ 0.47
HIST1H3AP68431 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HIST1H3AP68431 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
HIST1H3AP68431 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
HIST1H3AP68431 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
HIST1H3AP68431 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.02■□□□□ 0.47
HIST1H3AP68431 AL157384.1-201ENST00000445995 2473 ntBASIC18.01■□□□□ 0.47
HIST1H3AP68431 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HIST1H3AP68431 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HIST1H3AP68431 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HIST1H3AP68431 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.01■□□□□ 0.47
HIST1H3AP68431 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HIST1H3AP68431 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HIST1H3AP68431 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.01■□□□□ 0.47
HIST1H3AP68431 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HIST1H3AP68431 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.01■□□□□ 0.47
HIST1H3AP68431 MYCNOS-205ENST00000641950 531 ntBASIC18.01■□□□□ 0.47
HIST1H3AP68431 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HIST1H3AP68431 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HIST1H3AP68431 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HIST1H3AP68431 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18■□□□□ 0.47
HIST1H3AP68431 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18■□□□□ 0.47
HIST1H3AP68431 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18■□□□□ 0.47
HIST1H3AP68431 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18■□□□□ 0.47
HIST1H3AP68431 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
HIST1H3AP68431 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18■□□□□ 0.47
HIST1H3AP68431 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
HIST1H3AP68431 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18■□□□□ 0.47
HIST1H3AP68431 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HIST1H3AP68431 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18■□□□□ 0.47
HIST1H3AP68431 KRT18P5-201ENST00000436075 1291 ntBASIC18■□□□□ 0.47
HIST1H3AP68431 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HIST1H3AP68431 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18■□□□□ 0.47
HIST1H3AP68431 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18■□□□□ 0.47
HIST1H3AP68431 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18■□□□□ 0.47
HIST1H3AP68431 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HIST1H3AP68431 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HIST1H3AP68431 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HIST1H3AP68431 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18■□□□□ 0.47
HIST1H3AP68431 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HIST1H3AP68431 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HIST1H3AP68431 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
HIST1H3AP68431 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HIST1H3AP68431 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HIST1H3AP68431 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HIST1H3AP68431 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HIST1H3AP68431 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.99■□□□□ 0.47
HIST1H3AP68431 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.99■□□□□ 0.47
HIST1H3AP68431 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HIST1H3AP68431 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
HIST1H3AP68431 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.99■□□□□ 0.47
HIST1H3AP68431 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.99■□□□□ 0.47
HIST1H3AP68431 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.99■□□□□ 0.47
HIST1H3AP68431 RARRES2P6-201ENST00000567333 442 ntBASIC17.99■□□□□ 0.47
HIST1H3AP68431 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HIST1H3AP68431 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HIST1H3AP68431 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HIST1H3AP68431 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HIST1H3AP68431 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HIST1H3AP68431 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HIST1H3AP68431 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
HIST1H3AP68431 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
HIST1H3AP68431 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.99■□□□□ 0.47
HIST1H3AP68431 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.99■□□□□ 0.47
HIST1H3AP68431 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HIST1H3AP68431 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HIST1H3AP68431 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HIST1H3AP68431 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIST1H3AP68431 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIST1H3AP68431 AC073314.1-201ENST00000568729 2216 ntBASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms