Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42P60953 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDC42P60953 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.81■□□□□ 0.6
CDC42P60953 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDC42P60953 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.81■□□□□ 0.6
CDC42P60953 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CDC42P60953 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.81■□□□□ 0.6
CDC42P60953 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDC42P60953 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
CDC42P60953 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDC42P60953 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.81■□□□□ 0.6
CDC42P60953 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDC42P60953 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDC42P60953 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.81■□□□□ 0.6
CDC42P60953 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.81■□□□□ 0.6
CDC42P60953 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CDC42P60953 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.8■□□□□ 0.6
CDC42P60953 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.8■□□□□ 0.6
CDC42P60953 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC42P60953 SLC47A1P1-202ENST00000449666 945 ntBASIC18.8■□□□□ 0.6
CDC42P60953 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.8■□□□□ 0.6
CDC42P60953 MIR3621-201ENST00000580529 85 ntBASIC18.8■□□□□ 0.6
CDC42P60953 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.8■□□□□ 0.6
CDC42P60953 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.8■□□□□ 0.6
CDC42P60953 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC42P60953 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.8■□□□□ 0.6
CDC42P60953 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.8■□□□□ 0.6
CDC42P60953 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CDC42P60953 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.8■□□□□ 0.6
CDC42P60953 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC42P60953 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.79■□□□□ 0.6
CDC42P60953 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CDC42P60953 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42P60953 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42P60953 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.79■□□□□ 0.6
CDC42P60953 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42P60953 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42P60953 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42P60953 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42P60953 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42P60953 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.79■□□□□ 0.6
CDC42P60953 AC136469.2-201ENST00000623944 1028 ntBASIC18.79■□□□□ 0.6
CDC42P60953 SYT6-210ENST00000641643 1587 ntBASIC18.79■□□□□ 0.6
CDC42P60953 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42P60953 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42P60953 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42P60953 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CDC42P60953 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42P60953 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42P60953 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42P60953 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42P60953 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42P60953 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.78■□□□□ 0.6
CDC42P60953 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42P60953 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42P60953 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CDC42P60953 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42P60953 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42P60953 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42P60953 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.78■□□□□ 0.6
CDC42P60953 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CDC42P60953 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.78■□□□□ 0.6
CDC42P60953 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42P60953 DUX4L19-201ENST00000557448 1267 ntBASIC18.78■□□□□ 0.6
CDC42P60953 SMUG1P1-201ENST00000590640 811 ntBASIC18.78■□□□□ 0.6
CDC42P60953 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.78■□□□□ 0.6
CDC42P60953 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.78■□□□□ 0.6
CDC42P60953 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CDC42P60953 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42P60953 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42P60953 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42P60953 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42P60953 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42P60953 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42P60953 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42P60953 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDC42P60953 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CDC42P60953 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDC42P60953 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDC42P60953 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.77■□□□□ 0.6
CDC42P60953 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDC42P60953 SERBP1P1-201ENST00000396021 1160 ntBASIC18.77■□□□□ 0.6
CDC42P60953 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.77■□□□□ 0.6
CDC42P60953 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.77■□□□□ 0.6
CDC42P60953 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.77■□□□□ 0.6
CDC42P60953 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CDC42P60953 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDC42P60953 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDC42P60953 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.59
CDC42P60953 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CDC42P60953 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDC42P60953 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.76■□□□□ 0.59
CDC42P60953 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDC42P60953 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDC42P60953 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC42P60953 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC42P60953 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CDC42P60953 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC42P60953 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDC42P60953 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms