Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB38P57729 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
RAB38P57729 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RAB38P57729 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB38P57729 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB38P57729 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RAB38P57729 OR10C1-204ENST00000622521 1039 ntBASIC19.42■□□□□ 0.7
RAB38P57729 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB38P57729 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.42■□□□□ 0.7
RAB38P57729 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB38P57729 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB38P57729 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RAB38P57729 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB38P57729 AL137060.1-201ENST00000618151 2648 ntBASIC19.41■□□□□ 0.7
RAB38P57729 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB38P57729 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB38P57729 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RAB38P57729 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB38P57729 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB38P57729 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB38P57729 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB38P57729 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.41■□□□□ 0.7
RAB38P57729 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.41■□□□□ 0.7
RAB38P57729 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB38P57729 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB38P57729 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
RAB38P57729 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
RAB38P57729 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB38P57729 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB38P57729 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB38P57729 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RAB38P57729 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB38P57729 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB38P57729 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB38P57729 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB38P57729 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.4■□□□□ 0.7
RAB38P57729 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB38P57729 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RAB38P57729 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
RAB38P57729 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RAB38P57729 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB38P57729 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.4■□□□□ 0.7
RAB38P57729 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB38P57729 AC133552.2-202ENST00000575694 574 ntBASIC19.4■□□□□ 0.7
RAB38P57729 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RAB38P57729 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB38P57729 PLK5-205ENST00000642079 1969 ntBASIC19.4■□□□□ 0.7
RAB38P57729 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB38P57729 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB38P57729 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.4■□□□□ 0.7
RAB38P57729 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB38P57729 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.4■□□□□ 0.7
RAB38P57729 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB38P57729 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB38P57729 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB38P57729 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RAB38P57729 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.4■□□□□ 0.7
RAB38P57729 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB38P57729 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
RAB38P57729 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.4■□□□□ 0.7
RAB38P57729 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB38P57729 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.39■□□□□ 0.7
RAB38P57729 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAB38P57729 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB38P57729 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.39■□□□□ 0.69
RAB38P57729 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB38P57729 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB38P57729 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.39■□□□□ 0.69
RAB38P57729 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.39■□□□□ 0.69
RAB38P57729 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.39■□□□□ 0.69
RAB38P57729 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.39■□□□□ 0.69
RAB38P57729 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.39■□□□□ 0.69
RAB38P57729 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.39■□□□□ 0.69
RAB38P57729 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.39■□□□□ 0.69
RAB38P57729 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RAB38P57729 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB38P57729 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.39■□□□□ 0.69
RAB38P57729 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RAB38P57729 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.39■□□□□ 0.69
RAB38P57729 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB38P57729 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB38P57729 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB38P57729 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB38P57729 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RAB38P57729 AF201337.1-201ENST00000520239 748 ntBASIC19.38■□□□□ 0.69
RAB38P57729 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.38■□□□□ 0.69
RAB38P57729 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB38P57729 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
RAB38P57729 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.38■□□□□ 0.69
RAB38P57729 AL121832.2-201ENST00000610979 668 ntBASIC19.38■□□□□ 0.69
RAB38P57729 AC006128.1-201ENST00000624704 1661 ntBASIC19.38■□□□□ 0.69
RAB38P57729 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB38P57729 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB38P57729 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.37■□□□□ 0.69
RAB38P57729 AL512625.2-201ENST00000417533 625 ntBASIC19.37■□□□□ 0.69
RAB38P57729 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.37■□□□□ 0.69
RAB38P57729 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB38P57729 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.37■□□□□ 0.69
RAB38P57729 AC100791.3-201ENST00000617619 330 ntBASIC19.37■□□□□ 0.69
RAB38P57729 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms