Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
NR1H2P55055 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.46■□□□□ 0.71
NR1H2P55055 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.46■□□□□ 0.71
NR1H2P55055 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NR1H2P55055 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NR1H2P55055 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NR1H2P55055 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NR1H2P55055 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NR1H2P55055 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NR1H2P55055 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NR1H2P55055 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NR1H2P55055 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.45■□□□□ 0.7
NR1H2P55055 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
NR1H2P55055 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NR1H2P55055 MIR6821-201ENST00000617625 74 ntBASIC19.45■□□□□ 0.7
NR1H2P55055 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
NR1H2P55055 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NR1H2P55055 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NR1H2P55055 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NR1H2P55055 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
NR1H2P55055 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NR1H2P55055 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NR1H2P55055 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H2P55055 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H2P55055 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.44■□□□□ 0.7
NR1H2P55055 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H2P55055 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H2P55055 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H2P55055 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.44■□□□□ 0.7
NR1H2P55055 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.44■□□□□ 0.7
NR1H2P55055 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.44■□□□□ 0.7
NR1H2P55055 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H2P55055 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H2P55055 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H2P55055 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H2P55055 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H2P55055 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H2P55055 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.44■□□□□ 0.7
NR1H2P55055 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H2P55055 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H2P55055 AC026471.1-201ENST00000564629 3026 ntBASIC19.43■□□□□ 0.7
NR1H2P55055 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H2P55055 AC006128.1-201ENST00000624704 1661 ntBASIC19.43■□□□□ 0.7
NR1H2P55055 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NR1H2P55055 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NR1H2P55055 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H2P55055 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H2P55055 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H2P55055 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
NR1H2P55055 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H2P55055 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
NR1H2P55055 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.43■□□□□ 0.7
NR1H2P55055 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H2P55055 AC097381.1-201ENST00000429019 1296 ntBASIC19.43■□□□□ 0.7
NR1H2P55055 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.43■□□□□ 0.7
NR1H2P55055 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.43■□□□□ 0.7
NR1H2P55055 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
NR1H2P55055 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NR1H2P55055 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.43■□□□□ 0.7
NR1H2P55055 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H2P55055 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NR1H2P55055 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.43■□□□□ 0.7
NR1H2P55055 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H2P55055 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H2P55055 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H2P55055 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H2P55055 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.42■□□□□ 0.7
NR1H2P55055 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
NR1H2P55055 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H2P55055 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.42■□□□□ 0.7
NR1H2P55055 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.42■□□□□ 0.7
NR1H2P55055 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.42■□□□□ 0.7
NR1H2P55055 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H2P55055 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.42■□□□□ 0.7
NR1H2P55055 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H2P55055 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H2P55055 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H2P55055 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H2P55055 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H2P55055 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NR1H2P55055 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
NR1H2P55055 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H2P55055 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H2P55055 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NR1H2P55055 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NR1H2P55055 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H2P55055 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H2P55055 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.41■□□□□ 0.7
NR1H2P55055 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.41■□□□□ 0.7
NR1H2P55055 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NR1H2P55055 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.41■□□□□ 0.7
NR1H2P55055 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H2P55055 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.41■□□□□ 0.7
NR1H2P55055 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.41■□□□□ 0.7
NR1H2P55055 AC126544.1-201ENST00000580842 1059 ntBASIC19.41■□□□□ 0.7
NR1H2P55055 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H2P55055 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.41■□□□□ 0.7
NR1H2P55055 LINC01529-204ENST00000636474 1715 ntBASIC19.41■□□□□ 0.7
NR1H2P55055 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.41■□□□□ 0.7
NR1H2P55055 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms