Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLCN4P51793 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLCN4P51793 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.8■■□□□ 1.08
CLCN4P51793 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLCN4P51793 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.8■■□□□ 1.08
CLCN4P51793 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLCN4P51793 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLCN4P51793 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLCN4P51793 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLCN4P51793 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLCN4P51793 AC116050.2-201ENST00000612102 1779 ntBASIC21.79■■□□□ 1.08
CLCN4P51793 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLCN4P51793 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLCN4P51793 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLCN4P51793 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.79■■□□□ 1.08
CLCN4P51793 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLCN4P51793 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.79■■□□□ 1.08
CLCN4P51793 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CLCN4P51793 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLCN4P51793 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CLCN4P51793 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.79■■□□□ 1.08
CLCN4P51793 MIR4497-201ENST00000583208 89 ntBASIC21.79■■□□□ 1.08
CLCN4P51793 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.79■■□□□ 1.08
CLCN4P51793 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLCN4P51793 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.79■■□□□ 1.08
CLCN4P51793 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLCN4P51793 AC242852.2-201ENST00000615738 1807 ntBASIC21.78■■□□□ 1.08
CLCN4P51793 ECEL1P1-201ENST00000373592 1742 ntBASIC21.78■■□□□ 1.08
CLCN4P51793 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN4P51793 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN4P51793 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN4P51793 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN4P51793 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.78■■□□□ 1.08
CLCN4P51793 POM121L13P-201ENST00000422362 380 ntBASIC21.78■■□□□ 1.08
CLCN4P51793 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.78■■□□□ 1.08
CLCN4P51793 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.78■■□□□ 1.08
CLCN4P51793 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.78■■□□□ 1.08
CLCN4P51793 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.78■■□□□ 1.08
CLCN4P51793 Z99916.2-201ENST00000604037 246 ntBASIC21.78■■□□□ 1.08
CLCN4P51793 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.78■■□□□ 1.08
CLCN4P51793 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN4P51793 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN4P51793 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN4P51793 AC079834.2-201ENST00000609776 1949 ntBASIC21.78■■□□□ 1.08
CLCN4P51793 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN4P51793 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CLCN4P51793 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.78■■□□□ 1.08
CLCN4P51793 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.78■■□□□ 1.08
CLCN4P51793 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CLCN4P51793 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN4P51793 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CLCN4P51793 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN4P51793 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.77■■□□□ 1.08
CLCN4P51793 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN4P51793 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN4P51793 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN4P51793 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN4P51793 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.77■■□□□ 1.08
CLCN4P51793 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN4P51793 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN4P51793 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.77■■□□□ 1.08
CLCN4P51793 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.77■■□□□ 1.08
CLCN4P51793 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.77■■□□□ 1.08
CLCN4P51793 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.77■■□□□ 1.08
CLCN4P51793 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN4P51793 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN4P51793 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN4P51793 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN4P51793 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CLCN4P51793 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.77■■□□□ 1.07
CLCN4P51793 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN4P51793 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CLCN4P51793 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN4P51793 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN4P51793 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN4P51793 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN4P51793 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.76■■□□□ 1.07
CLCN4P51793 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN4P51793 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN4P51793 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN4P51793 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.76■■□□□ 1.07
CLCN4P51793 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.76■■□□□ 1.07
CLCN4P51793 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.76■■□□□ 1.07
CLCN4P51793 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN4P51793 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN4P51793 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.76■■□□□ 1.07
CLCN4P51793 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.76■■□□□ 1.07
CLCN4P51793 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN4P51793 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN4P51793 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN4P51793 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN4P51793 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.75■■□□□ 1.07
CLCN4P51793 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN4P51793 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN4P51793 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.75■■□□□ 1.07
CLCN4P51793 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CLCN4P51793 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.75■■□□□ 1.07
CLCN4P51793 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.75■■□□□ 1.07
CLCN4P51793 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN4P51793 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms