Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBE2AP49459 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC13.04□□□□□ -0.32
UBE2AP49459 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBE2AP49459 DYM-203ENST00000442713 2147 ntTSL 2 BASIC13.04□□□□□ -0.32
UBE2AP49459 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBE2AP49459 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBE2AP49459 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
UBE2AP49459 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBE2AP49459 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBE2AP49459 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBE2AP49459 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBE2AP49459 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBE2AP49459 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
UBE2AP49459 NME4-202ENST00000382940 766 ntTSL 3 BASIC13.04□□□□□ -0.32
UBE2AP49459 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC13.04□□□□□ -0.32
UBE2AP49459 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
UBE2AP49459 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UBE2AP49459 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC13.04□□□□□ -0.32
UBE2AP49459 NME4-211ENST00000620944 1193 ntTSL 2 BASIC13.04□□□□□ -0.32
UBE2AP49459 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBE2AP49459 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC13.04□□□□□ -0.32
UBE2AP49459 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBE2AP49459 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBE2AP49459 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC13.04□□□□□ -0.32
UBE2AP49459 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC13.04□□□□□ -0.32
UBE2AP49459 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBE2AP49459 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC13.04□□□□□ -0.32
UBE2AP49459 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBE2AP49459 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBE2AP49459 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBE2AP49459 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UBE2AP49459 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
UBE2AP49459 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBE2AP49459 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC13.04□□□□□ -0.32
UBE2AP49459 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC13.04□□□□□ -0.32
UBE2AP49459 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
UBE2AP49459 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBE2AP49459 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBE2AP49459 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBE2AP49459 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBE2AP49459 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC13.03□□□□□ -0.32
UBE2AP49459 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
UBE2AP49459 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBE2AP49459 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBE2AP49459 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBE2AP49459 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC13.03□□□□□ -0.32
UBE2AP49459 PXK-203ENST00000383715 1756 ntTSL 5 BASIC13.03□□□□□ -0.32
UBE2AP49459 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC13.03□□□□□ -0.32
UBE2AP49459 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBE2AP49459 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBE2AP49459 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBE2AP49459 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC13.03□□□□□ -0.32
UBE2AP49459 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
UBE2AP49459 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC13.03□□□□□ -0.32
UBE2AP49459 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC13.03□□□□□ -0.32
UBE2AP49459 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC13.03□□□□□ -0.32
UBE2AP49459 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC13.03□□□□□ -0.32
UBE2AP49459 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC13.03□□□□□ -0.32
UBE2AP49459 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
UBE2AP49459 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC13.03□□□□□ -0.32
UBE2AP49459 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBE2AP49459 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
UBE2AP49459 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC13.03□□□□□ -0.32
UBE2AP49459 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBE2AP49459 FEM1AP4-201ENST00000443167 1987 ntBASIC13.03□□□□□ -0.32
UBE2AP49459 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
UBE2AP49459 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
UBE2AP49459 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
UBE2AP49459 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
UBE2AP49459 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC13.03□□□□□ -0.32
UBE2AP49459 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
UBE2AP49459 AC005224.4-201ENST00000583262 1652 ntBASIC13.02□□□□□ -0.32
UBE2AP49459 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
UBE2AP49459 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC13.02□□□□□ -0.32
UBE2AP49459 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC13.02□□□□□ -0.32
UBE2AP49459 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UBE2AP49459 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
UBE2AP49459 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC13.02□□□□□ -0.32
UBE2AP49459 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
UBE2AP49459 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
UBE2AP49459 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UBE2AP49459 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UBE2AP49459 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2AP49459 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2AP49459 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC13.02□□□□□ -0.33
UBE2AP49459 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2AP49459 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC13.02□□□□□ -0.33
UBE2AP49459 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC13.02□□□□□ -0.33
UBE2AP49459 AL354811.1-201ENST00000610286 706 ntBASIC13.02□□□□□ -0.33
UBE2AP49459 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
UBE2AP49459 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC13.02□□□□□ -0.33
UBE2AP49459 AL136967.2-201ENST00000623968 743 ntBASIC13.02□□□□□ -0.33
UBE2AP49459 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2AP49459 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2AP49459 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC13.02□□□□□ -0.33
UBE2AP49459 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2AP49459 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2AP49459 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2AP49459 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2AP49459 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms