Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX5P45973 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CBX5P45973 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.69■□□□□ 0.42
CBX5P45973 AC073314.1-201ENST00000568729 2216 ntBASIC17.69■□□□□ 0.42
CBX5P45973 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CBX5P45973 PLK5-205ENST00000642079 1969 ntBASIC17.69■□□□□ 0.42
CBX5P45973 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX5P45973 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX5P45973 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.69■□□□□ 0.42
CBX5P45973 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.69■□□□□ 0.42
CBX5P45973 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX5P45973 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.68■□□□□ 0.42
CBX5P45973 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX5P45973 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CBX5P45973 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.68■□□□□ 0.42
CBX5P45973 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX5P45973 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CBX5P45973 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX5P45973 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX5P45973 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CBX5P45973 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CBX5P45973 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX5P45973 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.68■□□□□ 0.42
CBX5P45973 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CBX5P45973 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.68■□□□□ 0.42
CBX5P45973 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.68■□□□□ 0.42
CBX5P45973 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX5P45973 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CBX5P45973 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX5P45973 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CBX5P45973 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CBX5P45973 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.67■□□□□ 0.42
CBX5P45973 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CBX5P45973 AC121338.2-201ENST00000622535 1744 ntBASIC17.67■□□□□ 0.42
CBX5P45973 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CBX5P45973 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.67■□□□□ 0.42
CBX5P45973 AP005435.1-201ENST00000529293 1178 ntBASIC17.67■□□□□ 0.42
CBX5P45973 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CBX5P45973 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CBX5P45973 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CBX5P45973 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CBX5P45973 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CBX5P45973 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX5P45973 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
CBX5P45973 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
CBX5P45973 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX5P45973 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX5P45973 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX5P45973 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX5P45973 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CBX5P45973 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.66■□□□□ 0.42
CBX5P45973 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.66■□□□□ 0.42
CBX5P45973 AC010525.1-201ENST00000585559 441 ntBASIC17.66■□□□□ 0.42
CBX5P45973 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CBX5P45973 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX5P45973 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX5P45973 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.66■□□□□ 0.42
CBX5P45973 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX5P45973 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX5P45973 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CBX5P45973 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CBX5P45973 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CBX5P45973 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX5P45973 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CBX5P45973 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX5P45973 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CBX5P45973 UNC93B8-201ENST00000511903 705 ntBASIC17.65■□□□□ 0.42
CBX5P45973 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CBX5P45973 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX5P45973 AL356740.2-201ENST00000601559 647 ntBASIC17.65■□□□□ 0.42
CBX5P45973 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.65■□□□□ 0.42
CBX5P45973 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CBX5P45973 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX5P45973 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CBX5P45973 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX5P45973 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX5P45973 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX5P45973 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX5P45973 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX5P45973 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX5P45973 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CBX5P45973 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.65■□□□□ 0.42
CBX5P45973 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
CBX5P45973 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.64■□□□□ 0.42
CBX5P45973 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CBX5P45973 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
CBX5P45973 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.64■□□□□ 0.42
CBX5P45973 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CBX5P45973 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.64■□□□□ 0.41
CBX5P45973 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.64■□□□□ 0.41
CBX5P45973 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CBX5P45973 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CBX5P45973 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CBX5P45973 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.64■□□□□ 0.41
CBX5P45973 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.64■□□□□ 0.41
CBX5P45973 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CBX5P45973 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CBX5P45973 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.64■□□□□ 0.41
CBX5P45973 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CBX5P45973 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms