Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LCN1P31025 MIR935-201ENST00000401179 91 ntBASIC19.05■□□□□ 0.64
LCN1P31025 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.05■□□□□ 0.64
LCN1P31025 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.05■□□□□ 0.64
LCN1P31025 AC010536.3-201ENST00000620306 533 ntBASIC19.05■□□□□ 0.64
LCN1P31025 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LCN1P31025 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.05■□□□□ 0.64
LCN1P31025 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
LCN1P31025 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.05■□□□□ 0.64
LCN1P31025 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LCN1P31025 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LCN1P31025 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.05■□□□□ 0.64
LCN1P31025 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LCN1P31025 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.05■□□□□ 0.64
LCN1P31025 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
LCN1P31025 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LCN1P31025 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LCN1P31025 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LCN1P31025 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LCN1P31025 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LCN1P31025 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.04■□□□□ 0.64
LCN1P31025 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LCN1P31025 TERF1P5-201ENST00000477545 1207 ntBASIC19.04■□□□□ 0.64
LCN1P31025 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LCN1P31025 AC007322.4-201ENST00000509611 723 ntBASIC19.04■□□□□ 0.64
LCN1P31025 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.04■□□□□ 0.64
LCN1P31025 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LCN1P31025 AL162412.1-201ENST00000567129 965 ntBASIC19.04■□□□□ 0.64
LCN1P31025 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LCN1P31025 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
LCN1P31025 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LCN1P31025 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.03■□□□□ 0.64
LCN1P31025 AC005229.4-201ENST00000610085 2198 ntBASIC19.03■□□□□ 0.64
LCN1P31025 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.03■□□□□ 0.64
LCN1P31025 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LCN1P31025 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LCN1P31025 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.03■□□□□ 0.64
LCN1P31025 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LCN1P31025 AC091799.1-201ENST00000422823 811 ntBASIC19.03■□□□□ 0.64
LCN1P31025 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.03■□□□□ 0.64
LCN1P31025 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.03■□□□□ 0.64
LCN1P31025 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
LCN1P31025 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LCN1P31025 AC116050.2-201ENST00000612102 1779 ntBASIC19.03■□□□□ 0.64
LCN1P31025 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LCN1P31025 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
LCN1P31025 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LCN1P31025 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LCN1P31025 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LCN1P31025 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LCN1P31025 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LCN1P31025 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LCN1P31025 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LCN1P31025 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.02■□□□□ 0.64
LCN1P31025 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LCN1P31025 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LCN1P31025 AF106564.1-201ENST00000607058 2553 ntBASIC19.02■□□□□ 0.64
LCN1P31025 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LCN1P31025 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LCN1P31025 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LCN1P31025 AC013268.1-206ENST00000638368 961 ntBASIC19.02■□□□□ 0.64
LCN1P31025 AC112229.1-201ENST00000639295 961 ntBASIC19.02■□□□□ 0.64
LCN1P31025 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LCN1P31025 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LCN1P31025 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LCN1P31025 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.02■□□□□ 0.64
LCN1P31025 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LCN1P31025 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.02■□□□□ 0.63
LCN1P31025 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
LCN1P31025 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
LCN1P31025 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
LCN1P31025 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LCN1P31025 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
LCN1P31025 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LCN1P31025 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.01■□□□□ 0.63
LCN1P31025 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LCN1P31025 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.01■□□□□ 0.63
LCN1P31025 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LCN1P31025 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.01■□□□□ 0.63
LCN1P31025 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LCN1P31025 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LCN1P31025 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LCN1P31025 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.01■□□□□ 0.63
LCN1P31025 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.01■□□□□ 0.63
LCN1P31025 CDV3P1-201ENST00000471403 739 ntBASIC19.01■□□□□ 0.63
LCN1P31025 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.01■□□□□ 0.63
LCN1P31025 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
LCN1P31025 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.01■□□□□ 0.63
LCN1P31025 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
LCN1P31025 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.01■□□□□ 0.63
LCN1P31025 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
LCN1P31025 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
LCN1P31025 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LCN1P31025 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.01■□□□□ 0.63
LCN1P31025 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19■□□□□ 0.63
LCN1P31025 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LCN1P31025 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19■□□□□ 0.63
LCN1P31025 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19■□□□□ 0.63
LCN1P31025 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19■□□□□ 0.63
LCN1P31025 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms