Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SHC1P29353 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SHC1P29353 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SHC1P29353 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SHC1P29353 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHC1P29353 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.86■□□□□ 0.61
SHC1P29353 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.86■□□□□ 0.61
SHC1P29353 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SHC1P29353 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SHC1P29353 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHC1P29353 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.86■□□□□ 0.61
SHC1P29353 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.86■□□□□ 0.61
SHC1P29353 KRT18P20-201ENST00000548986 1279 ntBASIC18.86■□□□□ 0.61
SHC1P29353 MFSD11-216ENST00000590393 1141 ntBASIC18.86■□□□□ 0.61
SHC1P29353 AL137784.2-201ENST00000607332 1000 ntBASIC18.86■□□□□ 0.61
SHC1P29353 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHC1P29353 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.86■□□□□ 0.61
SHC1P29353 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHC1P29353 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.86■□□□□ 0.61
SHC1P29353 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHC1P29353 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHC1P29353 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SHC1P29353 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SHC1P29353 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHC1P29353 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SHC1P29353 LINC01006-201ENST00000333319 2292 ntBASIC18.85■□□□□ 0.61
SHC1P29353 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHC1P29353 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SHC1P29353 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHC1P29353 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SHC1P29353 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SHC1P29353 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.85■□□□□ 0.61
SHC1P29353 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SHC1P29353 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.85■□□□□ 0.61
SHC1P29353 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.85■□□□□ 0.61
SHC1P29353 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHC1P29353 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.85■□□□□ 0.61
SHC1P29353 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHC1P29353 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHC1P29353 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHC1P29353 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHC1P29353 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SHC1P29353 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SHC1P29353 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHC1P29353 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
SHC1P29353 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHC1P29353 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHC1P29353 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHC1P29353 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
SHC1P29353 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHC1P29353 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHC1P29353 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SHC1P29353 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHC1P29353 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SHC1P29353 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.84■□□□□ 0.61
SHC1P29353 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SHC1P29353 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SHC1P29353 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.84■□□□□ 0.61
SHC1P29353 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
SHC1P29353 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SHC1P29353 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.84■□□□□ 0.61
SHC1P29353 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHC1P29353 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHC1P29353 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SHC1P29353 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SHC1P29353 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.83■□□□□ 0.61
SHC1P29353 KRT16P2-201ENST00000414673 1423 ntBASIC18.83■□□□□ 0.61
SHC1P29353 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.83■□□□□ 0.61
SHC1P29353 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.83■□□□□ 0.61
SHC1P29353 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SHC1P29353 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SHC1P29353 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SHC1P29353 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SHC1P29353 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
SHC1P29353 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SHC1P29353 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SHC1P29353 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.83■□□□□ 0.6
SHC1P29353 AC120498.10-201ENST00000621827 505 ntBASIC18.83■□□□□ 0.6
SHC1P29353 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHC1P29353 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SHC1P29353 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.83■□□□□ 0.6
SHC1P29353 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHC1P29353 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHC1P29353 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHC1P29353 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHC1P29353 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHC1P29353 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHC1P29353 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.82■□□□□ 0.6
SHC1P29353 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHC1P29353 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SHC1P29353 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.82■□□□□ 0.6
SHC1P29353 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHC1P29353 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHC1P29353 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHC1P29353 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.82■□□□□ 0.6
SHC1P29353 KRT18P11-201ENST00000435214 1283 ntBASIC18.82■□□□□ 0.6
SHC1P29353 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.82■□□□□ 0.6
SHC1P29353 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHC1P29353 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.82■□□□□ 0.6
SHC1P29353 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms