Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
THRAP10827 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
THRAP10827 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
THRAP10827 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
THRAP10827 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.62■□□□□ 0.89
THRAP10827 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
THRAP10827 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
THRAP10827 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
THRAP10827 FEM1AP1-201ENST00000431297 1995 ntBASIC20.61■□□□□ 0.89
THRAP10827 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.61■□□□□ 0.89
THRAP10827 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
THRAP10827 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.61■□□□□ 0.89
THRAP10827 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.61■□□□□ 0.89
THRAP10827 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.61■□□□□ 0.89
THRAP10827 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.61■□□□□ 0.89
THRAP10827 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
THRAP10827 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
THRAP10827 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.61■□□□□ 0.89
THRAP10827 OR7E47P-201ENST00000546390 1422 ntBASIC20.61■□□□□ 0.89
THRAP10827 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
THRAP10827 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
THRAP10827 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
THRAP10827 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
THRAP10827 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
THRAP10827 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
THRAP10827 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.6■□□□□ 0.89
THRAP10827 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
THRAP10827 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
THRAP10827 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
THRAP10827 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.6■□□□□ 0.89
THRAP10827 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.6■□□□□ 0.89
THRAP10827 UBE2DNL-204ENST00000602536 740 ntBASIC20.6■□□□□ 0.89
THRAP10827 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.6■□□□□ 0.89
THRAP10827 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.59■□□□□ 0.89
THRAP10827 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
THRAP10827 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
THRAP10827 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
THRAP10827 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
THRAP10827 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
THRAP10827 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.59■□□□□ 0.89
THRAP10827 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
THRAP10827 NCF1B-203ENST00000435988 1254 ntBASIC20.59■□□□□ 0.89
THRAP10827 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.59■□□□□ 0.89
THRAP10827 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.59■□□□□ 0.89
THRAP10827 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.59■□□□□ 0.89
THRAP10827 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.59■□□□□ 0.89
THRAP10827 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.59■□□□□ 0.89
THRAP10827 AP001160.3-201ENST00000601484 763 ntBASIC20.59■□□□□ 0.89
THRAP10827 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
THRAP10827 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
THRAP10827 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
THRAP10827 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.58■□□□□ 0.89
THRAP10827 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.58■□□□□ 0.89
THRAP10827 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.89
THRAP10827 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
THRAP10827 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
THRAP10827 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
THRAP10827 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
THRAP10827 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.58■□□□□ 0.89
THRAP10827 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.58■□□□□ 0.89
THRAP10827 AL034346.1-201ENST00000568244 1277 ntBASIC20.58■□□□□ 0.89
THRAP10827 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.58■□□□□ 0.89
THRAP10827 AL109923.1-201ENST00000618799 583 ntBASIC20.58■□□□□ 0.89
THRAP10827 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.58■□□□□ 0.89
THRAP10827 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
THRAP10827 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
THRAP10827 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
THRAP10827 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
THRAP10827 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
THRAP10827 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.57■□□□□ 0.88
THRAP10827 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
THRAP10827 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.57■□□□□ 0.88
THRAP10827 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.57■□□□□ 0.88
THRAP10827 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
THRAP10827 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
THRAP10827 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
THRAP10827 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
THRAP10827 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
THRAP10827 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
THRAP10827 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
THRAP10827 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
THRAP10827 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
THRAP10827 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
THRAP10827 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
THRAP10827 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.57■□□□□ 0.88
THRAP10827 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.57■□□□□ 0.88
THRAP10827 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.57■□□□□ 0.88
THRAP10827 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
THRAP10827 MYCNOS-205ENST00000641950 531 ntBASIC20.57■□□□□ 0.88
THRAP10827 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
THRAP10827 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
THRAP10827 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
THRAP10827 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
THRAP10827 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
THRAP10827 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
THRAP10827 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
THRAP10827 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
THRAP10827 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
THRAP10827 AC231657.2-201ENST00000624556 255 ntBASIC20.56■□□□□ 0.88
THRAP10827 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms