Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SPARCP09486 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPARCP09486 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPARCP09486 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPARCP09486 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SPARCP09486 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPARCP09486 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPARCP09486 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPARCP09486 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPARCP09486 AP005212.1-201ENST00000581547 1997 ntBASIC18.32■□□□□ 0.52
SPARCP09486 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPARCP09486 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPARCP09486 IRS3P-201ENST00000223076 1006 ntBASIC18.32■□□□□ 0.52
SPARCP09486 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPARCP09486 AC105265.2-201ENST00000467189 838 ntBASIC18.32■□□□□ 0.52
SPARCP09486 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.32■□□□□ 0.52
SPARCP09486 AC008175.2-201ENST00000612840 297 ntBASIC18.32■□□□□ 0.52
SPARCP09486 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPARCP09486 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.32■□□□□ 0.52
SPARCP09486 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SPARCP09486 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.31■□□□□ 0.52
SPARCP09486 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.31■□□□□ 0.52
SPARCP09486 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPARCP09486 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SPARCP09486 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPARCP09486 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SPARCP09486 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPARCP09486 GABARAPL3-202ENST00000624044 1851 ntBASIC18.31■□□□□ 0.52
SPARCP09486 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPARCP09486 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SPARCP09486 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.31■□□□□ 0.52
SPARCP09486 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPARCP09486 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPARCP09486 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SPARCP09486 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SPARCP09486 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.31■□□□□ 0.52
SPARCP09486 AC005837.3-201ENST00000612163 286 ntBASIC18.31■□□□□ 0.52
SPARCP09486 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SPARCP09486 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPARCP09486 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.31■□□□□ 0.52
SPARCP09486 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPARCP09486 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPARCP09486 AL121603.2-201ENST00000557373 2117 ntBASIC18.31■□□□□ 0.52
SPARCP09486 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
SPARCP09486 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SPARCP09486 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPARCP09486 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPARCP09486 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPARCP09486 AC007225.1-201ENST00000566331 1836 ntBASIC18.3■□□□□ 0.52
SPARCP09486 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPARCP09486 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SPARCP09486 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SPARCP09486 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SPARCP09486 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPARCP09486 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SPARCP09486 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.3■□□□□ 0.52
SPARCP09486 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
SPARCP09486 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SPARCP09486 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SPARCP09486 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SPARCP09486 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPARCP09486 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPARCP09486 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.3■□□□□ 0.52
SPARCP09486 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPARCP09486 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPARCP09486 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.3■□□□□ 0.52
SPARCP09486 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.3■□□□□ 0.52
SPARCP09486 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPARCP09486 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SPARCP09486 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPARCP09486 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SPARCP09486 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SPARCP09486 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SPARCP09486 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SPARCP09486 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.29■□□□□ 0.52
SPARCP09486 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SPARCP09486 FP700111.2-201ENST00000619190 1892 ntBASIC18.29■□□□□ 0.52
SPARCP09486 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SPARCP09486 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPARCP09486 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SPARCP09486 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPARCP09486 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPARCP09486 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SPARCP09486 POU5F1P4-201ENST00000413175 1085 ntBASIC18.29■□□□□ 0.52
SPARCP09486 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.29■□□□□ 0.52
SPARCP09486 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.29■□□□□ 0.52
SPARCP09486 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.29■□□□□ 0.52
SPARCP09486 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.29■□□□□ 0.52
SPARCP09486 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPARCP09486 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPARCP09486 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPARCP09486 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPARCP09486 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPARCP09486 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPARCP09486 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
SPARCP09486 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPARCP09486 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPARCP09486 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPARCP09486 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPARCP09486 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 156 ms