Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GYPBP06028 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.5■□□□□ 0.55
GYPBP06028 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.5■□□□□ 0.55
GYPBP06028 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.5■□□□□ 0.55
GYPBP06028 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GYPBP06028 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GYPBP06028 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GYPBP06028 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.5■□□□□ 0.55
GYPBP06028 EEF1DP3-203ENST00000566025 782 ntBASIC18.5■□□□□ 0.55
GYPBP06028 AL031432.3-201ENST00000607698 485 ntBASIC18.5■□□□□ 0.55
GYPBP06028 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GYPBP06028 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GYPBP06028 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.5■□□□□ 0.55
GYPBP06028 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GYPBP06028 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GYPBP06028 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.5■□□□□ 0.55
GYPBP06028 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
GYPBP06028 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
GYPBP06028 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
GYPBP06028 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GYPBP06028 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GYPBP06028 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GYPBP06028 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GYPBP06028 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GYPBP06028 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GYPBP06028 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GYPBP06028 AC012414.1-201ENST00000556676 535 ntBASIC18.49■□□□□ 0.55
GYPBP06028 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.49■□□□□ 0.55
GYPBP06028 AC053503.5-201ENST00000601508 636 ntBASIC18.49■□□□□ 0.55
GYPBP06028 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
GYPBP06028 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GYPBP06028 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GYPBP06028 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.49■□□□□ 0.55
GYPBP06028 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GYPBP06028 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GYPBP06028 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.49■□□□□ 0.55
GYPBP06028 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GYPBP06028 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
GYPBP06028 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GYPBP06028 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GYPBP06028 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.48■□□□□ 0.55
GYPBP06028 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.48■□□□□ 0.55
GYPBP06028 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GYPBP06028 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.48■□□□□ 0.55
GYPBP06028 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
GYPBP06028 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GYPBP06028 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.48■□□□□ 0.55
GYPBP06028 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.48■□□□□ 0.55
GYPBP06028 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GYPBP06028 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GYPBP06028 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GYPBP06028 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GYPBP06028 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GYPBP06028 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.48■□□□□ 0.55
GYPBP06028 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
GYPBP06028 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.48■□□□□ 0.55
GYPBP06028 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GYPBP06028 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GYPBP06028 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
GYPBP06028 AP004607.4-201ENST00000530158 1459 ntBASIC18.47■□□□□ 0.55
GYPBP06028 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
GYPBP06028 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
GYPBP06028 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.47■□□□□ 0.55
GYPBP06028 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GYPBP06028 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GYPBP06028 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.47■□□□□ 0.55
GYPBP06028 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.47■□□□□ 0.55
GYPBP06028 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
GYPBP06028 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.47■□□□□ 0.55
GYPBP06028 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GYPBP06028 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.47■□□□□ 0.55
GYPBP06028 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.47■□□□□ 0.55
GYPBP06028 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GYPBP06028 AL512408.1-201ENST00000569378 2000 ntBASIC18.47■□□□□ 0.55
GYPBP06028 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GYPBP06028 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
GYPBP06028 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GYPBP06028 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.46■□□□□ 0.55
GYPBP06028 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GYPBP06028 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.46■□□□□ 0.55
GYPBP06028 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.46■□□□□ 0.55
GYPBP06028 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GYPBP06028 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GYPBP06028 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
GYPBP06028 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
GYPBP06028 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GYPBP06028 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.46■□□□□ 0.55
GYPBP06028 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.46■□□□□ 0.55
GYPBP06028 TPRG1LP1-201ENST00000598702 760 ntBASIC18.46■□□□□ 0.55
GYPBP06028 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.46■□□□□ 0.55
GYPBP06028 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
GYPBP06028 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.46■□□□□ 0.55
GYPBP06028 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GYPBP06028 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.46■□□□□ 0.55
GYPBP06028 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GYPBP06028 AC011484.1-201ENST00000377652 1995 ntBASIC18.46■□□□□ 0.55
GYPBP06028 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GYPBP06028 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GYPBP06028 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GYPBP06028 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms