Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
ERBB2P04626 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ERBB2P04626 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.71■■□□□ 1.07
ERBB2P04626 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
ERBB2P04626 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
ERBB2P04626 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.71■■□□□ 1.07
ERBB2P04626 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ERBB2P04626 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
ERBB2P04626 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ERBB2P04626 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
ERBB2P04626 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
ERBB2P04626 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ERBB2P04626 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ERBB2P04626 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
ERBB2P04626 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
ERBB2P04626 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ERBB2P04626 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ERBB2P04626 AC007322.4-201ENST00000509611 723 ntBASIC21.7■■□□□ 1.06
ERBB2P04626 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.7■■□□□ 1.06
ERBB2P04626 AL137784.2-201ENST00000607332 1000 ntBASIC21.7■■□□□ 1.06
ERBB2P04626 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ERBB2P04626 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ERBB2P04626 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.7■■□□□ 1.06
ERBB2P04626 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ERBB2P04626 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ERBB2P04626 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ERBB2P04626 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
ERBB2P04626 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
ERBB2P04626 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
ERBB2P04626 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.69■■□□□ 1.06
ERBB2P04626 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ERBB2P04626 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ERBB2P04626 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ERBB2P04626 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ERBB2P04626 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ERBB2P04626 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ERBB2P04626 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ERBB2P04626 AC007322.3-201ENST00000426526 701 ntBASIC21.69■■□□□ 1.06
ERBB2P04626 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.69■■□□□ 1.06
ERBB2P04626 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.69■■□□□ 1.06
ERBB2P04626 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.69■■□□□ 1.06
ERBB2P04626 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
ERBB2P04626 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ERBB2P04626 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.69■■□□□ 1.06
ERBB2P04626 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ERBB2P04626 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ERBB2P04626 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ERBB2P04626 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
ERBB2P04626 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.69■■□□□ 1.06
ERBB2P04626 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ERBB2P04626 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ERBB2P04626 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
ERBB2P04626 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ERBB2P04626 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ERBB2P04626 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
ERBB2P04626 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
ERBB2P04626 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ERBB2P04626 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
ERBB2P04626 AC016405.3-201ENST00000607710 860 ntBASIC21.68■■□□□ 1.06
ERBB2P04626 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.68■■□□□ 1.06
ERBB2P04626 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.68■■□□□ 1.06
ERBB2P04626 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ERBB2P04626 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.68■■□□□ 1.06
ERBB2P04626 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ERBB2P04626 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ERBB2P04626 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
ERBB2P04626 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.68■■□□□ 1.06
ERBB2P04626 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
ERBB2P04626 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.68■■□□□ 1.06
ERBB2P04626 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ERBB2P04626 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ERBB2P04626 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ERBB2P04626 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.67■■□□□ 1.06
ERBB2P04626 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.67■■□□□ 1.06
ERBB2P04626 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ERBB2P04626 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ERBB2P04626 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ERBB2P04626 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.67■■□□□ 1.06
ERBB2P04626 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ERBB2P04626 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ERBB2P04626 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
ERBB2P04626 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.67■■□□□ 1.06
ERBB2P04626 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ERBB2P04626 AL591742.1-201ENST00000604433 565 ntBASIC21.67■■□□□ 1.06
ERBB2P04626 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.67■■□□□ 1.06
ERBB2P04626 AC080038.1-201ENST00000611274 1154 ntBASIC21.67■■□□□ 1.06
ERBB2P04626 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ERBB2P04626 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
ERBB2P04626 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
ERBB2P04626 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
ERBB2P04626 AC027702.1-201ENST00000563810 1770 ntBASIC21.66■■□□□ 1.06
ERBB2P04626 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ERBB2P04626 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
ERBB2P04626 AC068338.2-201ENST00000563278 1430 ntBASIC21.66■■□□□ 1.06
ERBB2P04626 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ERBB2P04626 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.66■■□□□ 1.06
ERBB2P04626 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.66■■□□□ 1.06
ERBB2P04626 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.66■■□□□ 1.06
ERBB2P04626 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.66■■□□□ 1.06
ERBB2P04626 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms