Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
HLA-DPB1P04440 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
HLA-DPB1P04440 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.49■□□□□ 0.55
HLA-DPB1P04440 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DPB1P04440 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DPB1P04440 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HLA-DPB1P04440 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.49■□□□□ 0.55
HLA-DPB1P04440 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
HLA-DPB1P04440 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DPB1P04440 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.49■□□□□ 0.55
HLA-DPB1P04440 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DPB1P04440 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DPB1P04440 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.49■□□□□ 0.55
HLA-DPB1P04440 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DPB1P04440 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DPB1P04440 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.49■□□□□ 0.55
HLA-DPB1P04440 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.49■□□□□ 0.55
HLA-DPB1P04440 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.49■□□□□ 0.55
HLA-DPB1P04440 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
HLA-DPB1P04440 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.49■□□□□ 0.55
HLA-DPB1P04440 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DPB1P04440 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DPB1P04440 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DPB1P04440 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DPB1P04440 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DPB1P04440 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DPB1P04440 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.49■□□□□ 0.55
HLA-DPB1P04440 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
HLA-DPB1P04440 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPB1P04440 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPB1P04440 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPB1P04440 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPB1P04440 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HLA-DPB1P04440 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPB1P04440 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.48■□□□□ 0.55
HLA-DPB1P04440 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.48■□□□□ 0.55
HLA-DPB1P04440 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.48■□□□□ 0.55
HLA-DPB1P04440 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
HLA-DPB1P04440 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.48■□□□□ 0.55
HLA-DPB1P04440 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPB1P04440 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPB1P04440 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPB1P04440 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
HLA-DPB1P04440 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
HLA-DPB1P04440 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPB1P04440 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPB1P04440 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HLA-DPB1P04440 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.48■□□□□ 0.55
HLA-DPB1P04440 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPB1P04440 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DPB1P04440 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DPB1P04440 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DPB1P04440 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.47■□□□□ 0.55
HLA-DPB1P04440 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.47■□□□□ 0.55
HLA-DPB1P04440 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DPB1P04440 AC121338.2-201ENST00000622535 1744 ntBASIC18.47■□□□□ 0.55
HLA-DPB1P04440 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.47■□□□□ 0.55
HLA-DPB1P04440 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.47■□□□□ 0.55
HLA-DPB1P04440 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
HLA-DPB1P04440 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.47■□□□□ 0.55
HLA-DPB1P04440 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.47■□□□□ 0.55
HLA-DPB1P04440 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.47■□□□□ 0.55
HLA-DPB1P04440 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.47■□□□□ 0.55
HLA-DPB1P04440 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DPB1P04440 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DPB1P04440 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DPB1P04440 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DPB1P04440 AP004607.7-201ENST00000527152 1677 ntBASIC18.47■□□□□ 0.55
HLA-DPB1P04440 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DPB1P04440 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DPB1P04440 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DPB1P04440 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HLA-DPB1P04440 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HLA-DPB1P04440 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DPB1P04440 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DPB1P04440 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
HLA-DPB1P04440 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DPB1P04440 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
HLA-DPB1P04440 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DPB1P04440 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
HLA-DPB1P04440 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.46■□□□□ 0.55
HLA-DPB1P04440 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DPB1P04440 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.46■□□□□ 0.55
HLA-DPB1P04440 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.46■□□□□ 0.55
HLA-DPB1P04440 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.46■□□□□ 0.55
HLA-DPB1P04440 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.46■□□□□ 0.55
HLA-DPB1P04440 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DPB1P04440 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DPB1P04440 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.46■□□□□ 0.55
HLA-DPB1P04440 AC007225.1-201ENST00000566331 1836 ntBASIC18.46■□□□□ 0.55
HLA-DPB1P04440 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
HLA-DPB1P04440 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPB1P04440 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPB1P04440 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPB1P04440 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.45■□□□□ 0.54
HLA-DPB1P04440 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-DPB1P04440 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPB1P04440 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
HLA-DPB1P04440 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPB1P04440 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms