Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.26■□□□□ 0.67
PDGFAP04085 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFAP04085 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.25■□□□□ 0.67
PDGFAP04085 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.25■□□□□ 0.67
PDGFAP04085 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFAP04085 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFAP04085 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFAP04085 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFAP04085 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFAP04085 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFAP04085 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.25■□□□□ 0.67
PDGFAP04085 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.25■□□□□ 0.67
PDGFAP04085 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
PDGFAP04085 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PDGFAP04085 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFAP04085 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFAP04085 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFAP04085 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PDGFAP04085 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.25■□□□□ 0.67
PDGFAP04085 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PDGFAP04085 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.25■□□□□ 0.67
PDGFAP04085 AC008403.3-201ENST00000598924 454 ntBASIC19.25■□□□□ 0.67
PDGFAP04085 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.25■□□□□ 0.67
PDGFAP04085 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFAP04085 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFAP04085 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.25■□□□□ 0.67
PDGFAP04085 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.25■□□□□ 0.67
PDGFAP04085 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFAP04085 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFAP04085 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFAP04085 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFAP04085 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFAP04085 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFAP04085 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PDGFAP04085 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFAP04085 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
PDGFAP04085 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFAP04085 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.24■□□□□ 0.67
PDGFAP04085 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFAP04085 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFAP04085 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.24■□□□□ 0.67
PDGFAP04085 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.24■□□□□ 0.67
PDGFAP04085 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.24■□□□□ 0.67
PDGFAP04085 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFAP04085 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PDGFAP04085 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFAP04085 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFAP04085 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFAP04085 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PDGFAP04085 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFAP04085 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFAP04085 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
PDGFAP04085 AC139530.1-201ENST00000575312 1977 ntBASIC19.23■□□□□ 0.67
PDGFAP04085 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDGFAP04085 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDGFAP04085 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDGFAP04085 AC008550.1-201ENST00000511500 884 ntBASIC19.23■□□□□ 0.67
PDGFAP04085 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.23■□□□□ 0.67
PDGFAP04085 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDGFAP04085 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.23■□□□□ 0.67
PDGFAP04085 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.23■□□□□ 0.67
PDGFAP04085 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PDGFAP04085 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.23■□□□□ 0.67
PDGFAP04085 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFAP04085 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.22■□□□□ 0.67
PDGFAP04085 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PDGFAP04085 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFAP04085 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFAP04085 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.22■□□□□ 0.67
PDGFAP04085 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFAP04085 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.22■□□□□ 0.67
PDGFAP04085 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.22■□□□□ 0.67
PDGFAP04085 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PDGFAP04085 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PDGFAP04085 AL359736.2-201ENST00000621992 437 ntBASIC19.22■□□□□ 0.67
PDGFAP04085 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFAP04085 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PDGFAP04085 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFAP04085 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFAP04085 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFAP04085 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFAP04085 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFAP04085 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFAP04085 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFAP04085 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PDGFAP04085 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.22■□□□□ 0.67
PDGFAP04085 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDGFAP04085 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDGFAP04085 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDGFAP04085 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDGFAP04085 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDGFAP04085 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.21■□□□□ 0.67
PDGFAP04085 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PDGFAP04085 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.21■□□□□ 0.67
PDGFAP04085 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PDGFAP04085 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDGFAP04085 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDGFAP04085 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.21■□□□□ 0.67
PDGFAP04085 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDGFAP04085 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms