Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
APOC3P02656 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
APOC3P02656 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APOC3P02656 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
APOC3P02656 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APOC3P02656 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
APOC3P02656 CHST11-203ENST00000547956 936 ntTSL 2 BASIC16.65■□□□□ 0.26
APOC3P02656 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APOC3P02656 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC16.65■□□□□ 0.26
APOC3P02656 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APOC3P02656 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APOC3P02656 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.65■□□□□ 0.26
APOC3P02656 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.65■□□□□ 0.26
APOC3P02656 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.65■□□□□ 0.26
APOC3P02656 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APOC3P02656 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APOC3P02656 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APOC3P02656 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APOC3P02656 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.65■□□□□ 0.26
APOC3P02656 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
APOC3P02656 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.65■□□□□ 0.26
APOC3P02656 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APOC3P02656 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.65■□□□□ 0.26
APOC3P02656 AL162377.1-201ENST00000618844 1793 ntBASIC16.64■□□□□ 0.25
APOC3P02656 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOC3P02656 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOC3P02656 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
APOC3P02656 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
APOC3P02656 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOC3P02656 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
APOC3P02656 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
APOC3P02656 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOC3P02656 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
APOC3P02656 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.64■□□□□ 0.25
APOC3P02656 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
APOC3P02656 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOC3P02656 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOC3P02656 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.64■□□□□ 0.25
APOC3P02656 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOC3P02656 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
APOC3P02656 AP000997.3-201ENST00000623333 2250 ntBASIC16.64■□□□□ 0.25
APOC3P02656 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.64■□□□□ 0.25
APOC3P02656 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOC3P02656 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
APOC3P02656 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOC3P02656 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOC3P02656 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
APOC3P02656 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.64■□□□□ 0.25
APOC3P02656 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOC3P02656 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOC3P02656 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOC3P02656 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
APOC3P02656 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOC3P02656 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.63■□□□□ 0.25
APOC3P02656 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
APOC3P02656 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APOC3P02656 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.63■□□□□ 0.25
APOC3P02656 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOC3P02656 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC16.63■□□□□ 0.25
APOC3P02656 PFN2-211ENST00000489155 636 ntTSL 4 BASIC16.63■□□□□ 0.25
APOC3P02656 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOC3P02656 C17orf82-201ENST00000623772 1530 ntBASIC16.63■□□□□ 0.25
APOC3P02656 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.63■□□□□ 0.25
APOC3P02656 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOC3P02656 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.63■□□□□ 0.25
APOC3P02656 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOC3P02656 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOC3P02656 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOC3P02656 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOC3P02656 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOC3P02656 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APOC3P02656 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOC3P02656 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOC3P02656 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APOC3P02656 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APOC3P02656 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.62■□□□□ 0.25
APOC3P02656 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
APOC3P02656 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC16.62■□□□□ 0.25
APOC3P02656 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC16.62■□□□□ 0.25
APOC3P02656 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
APOC3P02656 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOC3P02656 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
APOC3P02656 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APOC3P02656 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
APOC3P02656 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOC3P02656 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
APOC3P02656 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
APOC3P02656 AC012313.1-201ENST00000593393 3059 ntBASIC16.61■□□□□ 0.25
APOC3P02656 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
APOC3P02656 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APOC3P02656 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
APOC3P02656 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
APOC3P02656 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.61■□□□□ 0.25
APOC3P02656 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
APOC3P02656 HTR7P1-202ENST00000624664 4411 ntBASIC16.61■□□□□ 0.25
APOC3P02656 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
APOC3P02656 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
APOC3P02656 AC126177.7-201ENST00000547904 679 ntBASIC16.61■□□□□ 0.25
APOC3P02656 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
APOC3P02656 AC005332.7-201ENST00000614046 2005 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms