Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.56■■□□□ 1.2
TIMP1P01033 AC116050.2-201ENST00000612102 1779 ntBASIC22.55■■□□□ 1.2
TIMP1P01033 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
TIMP1P01033 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
TIMP1P01033 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TIMP1P01033 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TIMP1P01033 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
TIMP1P01033 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
TIMP1P01033 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TIMP1P01033 AL353708.3-201ENST00000610272 989 ntBASIC22.55■■□□□ 1.2
TIMP1P01033 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TIMP1P01033 AC026471.6-201ENST00000622954 1905 ntBASIC22.55■■□□□ 1.2
TIMP1P01033 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TIMP1P01033 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.55■■□□□ 1.2
TIMP1P01033 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
TIMP1P01033 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TIMP1P01033 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
TIMP1P01033 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.54■■□□□ 1.2
TIMP1P01033 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TIMP1P01033 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.54■■□□□ 1.2
TIMP1P01033 KRT18P35-201ENST00000510488 1269 ntBASIC22.54■■□□□ 1.2
TIMP1P01033 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.54■■□□□ 1.2
TIMP1P01033 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.54■■□□□ 1.2
TIMP1P01033 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TIMP1P01033 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
TIMP1P01033 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.54■■□□□ 1.2
TIMP1P01033 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TIMP1P01033 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TIMP1P01033 AC068473.5-201ENST00000616428 2072 ntBASIC22.54■■□□□ 1.2
TIMP1P01033 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.54■■□□□ 1.2
TIMP1P01033 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TIMP1P01033 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.53■■□□□ 1.2
TIMP1P01033 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TIMP1P01033 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TIMP1P01033 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.53■■□□□ 1.2
TIMP1P01033 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TIMP1P01033 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TIMP1P01033 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.53■■□□□ 1.2
TIMP1P01033 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TIMP1P01033 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
TIMP1P01033 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC22.53■■□□□ 1.2
TIMP1P01033 RN7SL850P-201ENST00000579959 291 ntBASIC22.53■■□□□ 1.2
TIMP1P01033 NT5C-211ENST00000582170 653 ntTSL 3 BASIC22.53■■□□□ 1.2
TIMP1P01033 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.53■■□□□ 1.2
TIMP1P01033 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TIMP1P01033 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.53■■□□□ 1.2
TIMP1P01033 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.53■■□□□ 1.2
TIMP1P01033 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TIMP1P01033 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TIMP1P01033 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TIMP1P01033 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.52■■□□□ 1.2
TIMP1P01033 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TIMP1P01033 AC087633.2-202ENST00000565166 1439 ntBASIC22.52■■□□□ 1.2
TIMP1P01033 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TIMP1P01033 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC22.52■■□□□ 1.2
TIMP1P01033 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
TIMP1P01033 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TIMP1P01033 AC026471.5-201ENST00000615068 467 ntBASIC22.52■■□□□ 1.2
TIMP1P01033 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TIMP1P01033 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.52■■□□□ 1.2
TIMP1P01033 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TIMP1P01033 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.52■■□□□ 1.2
TIMP1P01033 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
TIMP1P01033 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.52■■□□□ 1.2
TIMP1P01033 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TIMP1P01033 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.52■■□□□ 1.2
TIMP1P01033 AC010542.4-201ENST00000563151 1910 ntBASIC22.51■■□□□ 1.19
TIMP1P01033 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.51■■□□□ 1.19
TIMP1P01033 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
TIMP1P01033 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
TIMP1P01033 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.51■■□□□ 1.19
TIMP1P01033 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
TIMP1P01033 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC22.51■■□□□ 1.19
TIMP1P01033 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
TIMP1P01033 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
TIMP1P01033 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TIMP1P01033 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TIMP1P01033 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TIMP1P01033 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
TIMP1P01033 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
TIMP1P01033 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.5■■□□□ 1.19
TIMP1P01033 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TIMP1P01033 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TIMP1P01033 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TIMP1P01033 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TIMP1P01033 ARMC10P1-201ENST00000313754 855 ntBASIC22.5■■□□□ 1.19
TIMP1P01033 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TIMP1P01033 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TIMP1P01033 AL390719.1-204ENST00000412397 1219 ntBASIC22.5■■□□□ 1.19
TIMP1P01033 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
TIMP1P01033 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC22.5■■□□□ 1.19
TIMP1P01033 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.5■■□□□ 1.19
TIMP1P01033 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
TIMP1P01033 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TIMP1P01033 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
TIMP1P01033 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TIMP1P01033 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TIMP1P01033 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TIMP1P01033 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.49■■□□□ 1.19
TIMP1P01033 MMP23A-201ENST00000234610 1017 ntBASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms