Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AL355802.2-201ENST00000402069 882 ntBASIC21.13■□□□□ 0.97
MT-CO1P00395 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.13■□□□□ 0.97
MT-CO1P00395 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.13■□□□□ 0.97
MT-CO1P00395 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.13■□□□□ 0.97
MT-CO1P00395 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
MT-CO1P00395 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.13■□□□□ 0.97
MT-CO1P00395 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MT-CO1P00395 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
MT-CO1P00395 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MT-CO1P00395 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.13■□□□□ 0.97
MT-CO1P00395 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MT-CO1P00395 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
MT-CO1P00395 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
MT-CO1P00395 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MT-CO1P00395 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.12■□□□□ 0.97
MT-CO1P00395 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
MT-CO1P00395 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MT-CO1P00395 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.12■□□□□ 0.97
MT-CO1P00395 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.12■□□□□ 0.97
MT-CO1P00395 AL138781.1-201ENST00000566567 1274 ntBASIC21.12■□□□□ 0.97
MT-CO1P00395 AL162412.1-201ENST00000567129 965 ntBASIC21.12■□□□□ 0.97
MT-CO1P00395 OR10C1-204ENST00000622521 1039 ntBASIC21.12■□□□□ 0.97
MT-CO1P00395 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MT-CO1P00395 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MT-CO1P00395 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MT-CO1P00395 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MT-CO1P00395 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.12■□□□□ 0.97
MT-CO1P00395 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
MT-CO1P00395 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.11■□□□□ 0.97
MT-CO1P00395 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MT-CO1P00395 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MT-CO1P00395 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MT-CO1P00395 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MT-CO1P00395 RARRES2P4-201ENST00000514074 484 ntBASIC21.11■□□□□ 0.97
MT-CO1P00395 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.11■□□□□ 0.97
MT-CO1P00395 AC069236.1-201ENST00000604339 616 ntBASIC21.11■□□□□ 0.97
MT-CO1P00395 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.11■□□□□ 0.97
MT-CO1P00395 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.11■□□□□ 0.97
MT-CO1P00395 AC008694.1-202ENST00000636953 945 ntBASIC21.11■□□□□ 0.97
MT-CO1P00395 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
MT-CO1P00395 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.11■□□□□ 0.97
MT-CO1P00395 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MT-CO1P00395 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
MT-CO1P00395 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MT-CO1P00395 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MT-CO1P00395 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MT-CO1P00395 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
MT-CO1P00395 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MT-CO1P00395 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
MT-CO1P00395 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MT-CO1P00395 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MT-CO1P00395 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
MT-CO1P00395 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
MT-CO1P00395 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MT-CO1P00395 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.1■□□□□ 0.97
MT-CO1P00395 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MT-CO1P00395 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MT-CO1P00395 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MT-CO1P00395 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
MT-CO1P00395 AL024507.2-201ENST00000606070 2574 ntBASIC21.09■□□□□ 0.97
MT-CO1P00395 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
MT-CO1P00395 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.09■□□□□ 0.97
MT-CO1P00395 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MT-CO1P00395 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
MT-CO1P00395 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.09■□□□□ 0.97
MT-CO1P00395 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MT-CO1P00395 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MT-CO1P00395 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MT-CO1P00395 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.09■□□□□ 0.97
MT-CO1P00395 AC142086.2-201ENST00000569753 217 ntBASIC21.09■□□□□ 0.97
MT-CO1P00395 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.09■□□□□ 0.97
MT-CO1P00395 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MT-CO1P00395 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.09■□□□□ 0.97
MT-CO1P00395 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.09■□□□□ 0.97
MT-CO1P00395 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.09■□□□□ 0.97
MT-CO1P00395 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MT-CO1P00395 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
MT-CO1P00395 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MT-CO1P00395 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MT-CO1P00395 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MT-CO1P00395 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MT-CO1P00395 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
MT-CO1P00395 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
MT-CO1P00395 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MT-CO1P00395 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
MT-CO1P00395 SLC29A4P1-201ENST00000398760 971 ntBASIC21.08■□□□□ 0.97
MT-CO1P00395 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
MT-CO1P00395 AL512625.2-201ENST00000417533 625 ntBASIC21.08■□□□□ 0.97
MT-CO1P00395 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.08■□□□□ 0.97
MT-CO1P00395 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MT-CO1P00395 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
MT-CO1P00395 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.08■□□□□ 0.97
MT-CO1P00395 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.08■□□□□ 0.97
MT-CO1P00395 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.08■□□□□ 0.97
MT-CO1P00395 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
MT-CO1P00395 MKRN4P-201ENST00000444706 1521 ntBASIC21.08■□□□□ 0.96
MT-CO1P00395 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
MT-CO1P00395 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
MT-CO1P00395 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.08■□□□□ 0.96
MT-CO1P00395 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms