Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOMM40O96008 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOMM40O96008 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOMM40O96008 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOMM40O96008 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.11■□□□□ 0.17
TOMM40O96008 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOMM40O96008 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.11■□□□□ 0.17
TOMM40O96008 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.11■□□□□ 0.17
TOMM40O96008 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOMM40O96008 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.11■□□□□ 0.17
TOMM40O96008 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOMM40O96008 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
TOMM40O96008 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOMM40O96008 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOMM40O96008 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.11■□□□□ 0.17
TOMM40O96008 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOMM40O96008 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TOMM40O96008 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.1■□□□□ 0.17
TOMM40O96008 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TOMM40O96008 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.1■□□□□ 0.17
TOMM40O96008 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.1■□□□□ 0.17
TOMM40O96008 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TOMM40O96008 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TOMM40O96008 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TOMM40O96008 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
TOMM40O96008 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TOMM40O96008 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TOMM40O96008 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TOMM40O96008 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TOMM40O96008 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TOMM40O96008 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TOMM40O96008 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.1■□□□□ 0.17
TOMM40O96008 TPRG1LP1-201ENST00000598702 760 ntBASIC16.1■□□□□ 0.17
TOMM40O96008 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TOMM40O96008 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.1■□□□□ 0.17
TOMM40O96008 AL358852.1-201ENST00000623174 1268 ntBASIC16.1■□□□□ 0.17
TOMM40O96008 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
TOMM40O96008 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TOMM40O96008 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.1■□□□□ 0.17
TOMM40O96008 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.1■□□□□ 0.17
TOMM40O96008 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TOMM40O96008 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TOMM40O96008 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TOMM40O96008 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TOMM40O96008 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.1■□□□□ 0.17
TOMM40O96008 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TOMM40O96008 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TOMM40O96008 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TOMM40O96008 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOMM40O96008 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.09■□□□□ 0.17
TOMM40O96008 AP005212.1-201ENST00000581547 1997 ntBASIC16.09■□□□□ 0.17
TOMM40O96008 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOMM40O96008 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOMM40O96008 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOMM40O96008 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOMM40O96008 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOMM40O96008 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOMM40O96008 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
TOMM40O96008 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TOMM40O96008 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOMM40O96008 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TOMM40O96008 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.09■□□□□ 0.17
TOMM40O96008 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOMM40O96008 AL020996.1-203ENST00000536896 2307 ntBASIC16.09■□□□□ 0.17
TOMM40O96008 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TOMM40O96008 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TOMM40O96008 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TOMM40O96008 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TOMM40O96008 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TOMM40O96008 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
TOMM40O96008 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
TOMM40O96008 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.08■□□□□ 0.17
TOMM40O96008 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TOMM40O96008 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.08■□□□□ 0.16
TOMM40O96008 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
TOMM40O96008 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TOMM40O96008 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TOMM40O96008 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
TOMM40O96008 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TOMM40O96008 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.08■□□□□ 0.16
TOMM40O96008 SUDS3P1-201ENST00000505831 966 ntBASIC16.08■□□□□ 0.16
TOMM40O96008 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.08■□□□□ 0.16
TOMM40O96008 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
TOMM40O96008 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TOMM40O96008 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TOMM40O96008 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TOMM40O96008 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TOMM40O96008 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TOMM40O96008 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TOMM40O96008 AC007225.1-201ENST00000566331 1836 ntBASIC16.08■□□□□ 0.16
TOMM40O96008 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
TOMM40O96008 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TOMM40O96008 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TOMM40O96008 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TOMM40O96008 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.07■□□□□ 0.16
TOMM40O96008 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TOMM40O96008 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TOMM40O96008 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TOMM40O96008 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TOMM40O96008 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms