Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NKX2-2O95096 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NKX2-2O95096 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NKX2-2O95096 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NKX2-2O95096 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
NKX2-2O95096 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NKX2-2O95096 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
NKX2-2O95096 CDV3P1-201ENST00000471403 739 ntBASIC19.06■□□□□ 0.64
NKX2-2O95096 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.06■□□□□ 0.64
NKX2-2O95096 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.06■□□□□ 0.64
NKX2-2O95096 AC013268.1-206ENST00000638368 961 ntBASIC19.06■□□□□ 0.64
NKX2-2O95096 AC112229.1-201ENST00000639295 961 ntBASIC19.06■□□□□ 0.64
NKX2-2O95096 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.06■□□□□ 0.64
NKX2-2O95096 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NKX2-2O95096 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.06■□□□□ 0.64
NKX2-2O95096 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NKX2-2O95096 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NKX2-2O95096 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
NKX2-2O95096 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NKX2-2O95096 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NKX2-2O95096 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NKX2-2O95096 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
NKX2-2O95096 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
NKX2-2O95096 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NKX2-2O95096 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.05■□□□□ 0.64
NKX2-2O95096 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
NKX2-2O95096 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.05■□□□□ 0.64
NKX2-2O95096 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NKX2-2O95096 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.05■□□□□ 0.64
NKX2-2O95096 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
NKX2-2O95096 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NKX2-2O95096 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NKX2-2O95096 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
NKX2-2O95096 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NKX2-2O95096 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.05■□□□□ 0.64
NKX2-2O95096 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.05■□□□□ 0.64
NKX2-2O95096 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
NKX2-2O95096 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.04■□□□□ 0.64
NKX2-2O95096 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NKX2-2O95096 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NKX2-2O95096 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NKX2-2O95096 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NKX2-2O95096 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.04■□□□□ 0.64
NKX2-2O95096 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
NKX2-2O95096 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NKX2-2O95096 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NKX2-2O95096 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NKX2-2O95096 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.04■□□□□ 0.64
NKX2-2O95096 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.04■□□□□ 0.64
NKX2-2O95096 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.04■□□□□ 0.64
NKX2-2O95096 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.04■□□□□ 0.64
NKX2-2O95096 DUX4L16-201ENST00000555130 1264 ntBASIC19.04■□□□□ 0.64
NKX2-2O95096 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.04■□□□□ 0.64
NKX2-2O95096 AL591742.1-201ENST00000604433 565 ntBASIC19.04■□□□□ 0.64
NKX2-2O95096 AC011767.1-201ENST00000617410 1153 ntBASIC19.04■□□□□ 0.64
NKX2-2O95096 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NKX2-2O95096 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.04■□□□□ 0.64
NKX2-2O95096 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.04■□□□□ 0.64
NKX2-2O95096 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
NKX2-2O95096 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
NKX2-2O95096 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NKX2-2O95096 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.03■□□□□ 0.64
NKX2-2O95096 FP700111.2-201ENST00000619190 1892 ntBASIC19.03■□□□□ 0.64
NKX2-2O95096 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NKX2-2O95096 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NKX2-2O95096 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NKX2-2O95096 FEM1AP1-201ENST00000431297 1995 ntBASIC19.03■□□□□ 0.64
NKX2-2O95096 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NKX2-2O95096 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.03■□□□□ 0.64
NKX2-2O95096 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
NKX2-2O95096 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.03■□□□□ 0.64
NKX2-2O95096 AL162412.1-201ENST00000567129 965 ntBASIC19.03■□□□□ 0.64
NKX2-2O95096 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.03■□□□□ 0.64
NKX2-2O95096 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.03■□□□□ 0.64
NKX2-2O95096 BID-214ENST00000617586 542 ntTSL 5 BASIC19.03■□□□□ 0.64
NKX2-2O95096 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NKX2-2O95096 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
NKX2-2O95096 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NKX2-2O95096 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NKX2-2O95096 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NKX2-2O95096 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.03■□□□□ 0.64
NKX2-2O95096 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
NKX2-2O95096 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NKX2-2O95096 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NKX2-2O95096 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
NKX2-2O95096 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.03■□□□□ 0.64
NKX2-2O95096 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NKX2-2O95096 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NKX2-2O95096 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
NKX2-2O95096 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.02■□□□□ 0.64
NKX2-2O95096 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.02■□□□□ 0.64
NKX2-2O95096 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.02■□□□□ 0.64
NKX2-2O95096 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
NKX2-2O95096 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
NKX2-2O95096 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.02■□□□□ 0.64
NKX2-2O95096 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NKX2-2O95096 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NKX2-2O95096 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
NKX2-2O95096 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NKX2-2O95096 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms