Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.7■□□□□ 0.9
RFPL1O75677 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFPL1O75677 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFPL1O75677 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFPL1O75677 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFPL1O75677 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.7■□□□□ 0.9
RFPL1O75677 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFPL1O75677 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFPL1O75677 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFPL1O75677 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFPL1O75677 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFPL1O75677 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
RFPL1O75677 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFPL1O75677 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFPL1O75677 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RFPL1O75677 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.69■□□□□ 0.9
RFPL1O75677 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.69■□□□□ 0.9
RFPL1O75677 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.69■□□□□ 0.9
RFPL1O75677 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFPL1O75677 NTF6G-201ENST00000591094 616 ntBASIC20.69■□□□□ 0.9
RFPL1O75677 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.69■□□□□ 0.9
RFPL1O75677 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.69■□□□□ 0.9
RFPL1O75677 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFPL1O75677 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFPL1O75677 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFPL1O75677 LINC02228-203ENST00000641970 1355 ntBASIC20.69■□□□□ 0.9
RFPL1O75677 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RFPL1O75677 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFPL1O75677 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFPL1O75677 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RFPL1O75677 AL512408.1-201ENST00000569378 2000 ntBASIC20.68■□□□□ 0.9
RFPL1O75677 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.68■□□□□ 0.9
RFPL1O75677 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFPL1O75677 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.68■□□□□ 0.9
RFPL1O75677 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RFPL1O75677 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFPL1O75677 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFPL1O75677 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.68■□□□□ 0.9
RFPL1O75677 KRT18P14-201ENST00000534205 1250 ntBASIC20.68■□□□□ 0.9
RFPL1O75677 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RFPL1O75677 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFPL1O75677 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFPL1O75677 FP700111.2-201ENST00000619190 1892 ntBASIC20.68■□□□□ 0.9
RFPL1O75677 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFPL1O75677 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.68■□□□□ 0.9
RFPL1O75677 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFPL1O75677 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFPL1O75677 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFPL1O75677 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFPL1O75677 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFPL1O75677 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFPL1O75677 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFPL1O75677 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFPL1O75677 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.67■□□□□ 0.9
RFPL1O75677 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.67■□□□□ 0.9
RFPL1O75677 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFPL1O75677 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.67■□□□□ 0.9
RFPL1O75677 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
RFPL1O75677 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFPL1O75677 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RFPL1O75677 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RFPL1O75677 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.67■□□□□ 0.9
RFPL1O75677 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.67■□□□□ 0.9
RFPL1O75677 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.67■□□□□ 0.9
RFPL1O75677 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.67■□□□□ 0.9
RFPL1O75677 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFPL1O75677 AC105233.4-201ENST00000642045 216 ntBASIC20.67■□□□□ 0.9
RFPL1O75677 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
RFPL1O75677 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFPL1O75677 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFPL1O75677 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RFPL1O75677 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFPL1O75677 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFPL1O75677 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFPL1O75677 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
RFPL1O75677 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFPL1O75677 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFPL1O75677 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFPL1O75677 ID1-201ENST00000376105 1233 ntBASIC20.66■□□□□ 0.9
RFPL1O75677 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.66■□□□□ 0.9
RFPL1O75677 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.66■□□□□ 0.9
RFPL1O75677 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFPL1O75677 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.66■□□□□ 0.9
RFPL1O75677 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFPL1O75677 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RFPL1O75677 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.66■□□□□ 0.9
RFPL1O75677 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.65■□□□□ 0.9
RFPL1O75677 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
RFPL1O75677 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.65■□□□□ 0.9
RFPL1O75677 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.65■□□□□ 0.9
RFPL1O75677 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.65■□□□□ 0.9
RFPL1O75677 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFPL1O75677 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RFPL1O75677 TERF1P2-201ENST00000583350 1212 ntBASIC20.65■□□□□ 0.9
RFPL1O75677 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RFPL1O75677 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.65■□□□□ 0.9
RFPL1O75677 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFPL1O75677 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFPL1O75677 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFPL1O75677 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms