Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
BRD4O60885 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
BRD4O60885 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
BRD4O60885 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC28.64■■■□□ 2.18
BRD4O60885 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
BRD4O60885 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC28.64■■■□□ 2.18
BRD4O60885 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC28.64■■■□□ 2.18
BRD4O60885 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC28.64■■■□□ 2.18
BRD4O60885 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC28.64■■■□□ 2.18
BRD4O60885 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.18
BRD4O60885 AC006058.3-201ENST00000606217 1069 ntBASIC28.64■■■□□ 2.18
BRD4O60885 AP006294.2-201ENST00000641667 209 ntBASIC28.64■■■□□ 2.18
BRD4O60885 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC28.64■■■□□ 2.18
BRD4O60885 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
BRD4O60885 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC28.64■■■□□ 2.17
BRD4O60885 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC28.64■■■□□ 2.17
BRD4O60885 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
BRD4O60885 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
BRD4O60885 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC28.63■■■□□ 2.17
BRD4O60885 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
BRD4O60885 LSM12P1-201ENST00000411836 588 ntBASIC28.63■■■□□ 2.17
BRD4O60885 AC128676.1-201ENST00000454392 318 ntBASIC28.63■■■□□ 2.17
BRD4O60885 AP003097.1-201ENST00000530657 1135 ntBASIC28.63■■■□□ 2.17
BRD4O60885 CYP2T3P-201ENST00000601990 817 ntBASIC28.63■■■□□ 2.17
BRD4O60885 MMD2-204ENST00000612910 778 ntTSL 5 BASIC28.63■■■□□ 2.17
BRD4O60885 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
BRD4O60885 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC28.63■■■□□ 2.17
BRD4O60885 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
BRD4O60885 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
BRD4O60885 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
BRD4O60885 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
BRD4O60885 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
BRD4O60885 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
BRD4O60885 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
BRD4O60885 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC28.63■■■□□ 2.17
BRD4O60885 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
BRD4O60885 AC245052.3-201ENST00000450182 901 ntBASIC28.62■■■□□ 2.17
BRD4O60885 OR2A1-AS1-201ENST00000462305 773 ntBASIC28.62■■■□□ 2.17
BRD4O60885 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC28.62■■■□□ 2.17
BRD4O60885 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
BRD4O60885 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
BRD4O60885 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC28.62■■■□□ 2.17
BRD4O60885 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
BRD4O60885 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
BRD4O60885 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
BRD4O60885 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC28.62■■■□□ 2.17
BRD4O60885 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
BRD4O60885 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
BRD4O60885 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC28.62■■■□□ 2.17
BRD4O60885 SAPCD2P1-201ENST00000395413 1184 ntBASIC28.62■■■□□ 2.17
BRD4O60885 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC28.62■■■□□ 2.17
BRD4O60885 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC28.62■■■□□ 2.17
BRD4O60885 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
BRD4O60885 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
BRD4O60885 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
BRD4O60885 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
BRD4O60885 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
BRD4O60885 FEM1AP4-201ENST00000443167 1987 ntBASIC28.61■■■□□ 2.17
BRD4O60885 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC28.61■■■□□ 2.17
BRD4O60885 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
BRD4O60885 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
BRD4O60885 KRT17P1-201ENST00000399211 1546 ntBASIC28.61■■■□□ 2.17
BRD4O60885 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
BRD4O60885 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC28.61■■■□□ 2.17
BRD4O60885 CDV3P1-201ENST00000471403 739 ntBASIC28.61■■■□□ 2.17
BRD4O60885 AC060766.5-201ENST00000590539 871 ntBASIC28.61■■■□□ 2.17
BRD4O60885 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
BRD4O60885 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC28.6■■■□□ 2.17
BRD4O60885 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
BRD4O60885 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.17
BRD4O60885 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
BRD4O60885 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
BRD4O60885 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
BRD4O60885 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
BRD4O60885 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
BRD4O60885 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC28.6■■■□□ 2.17
BRD4O60885 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
BRD4O60885 HLA-B-256ENST00000639848 1089 ntBASIC28.6■■■□□ 2.17
BRD4O60885 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
BRD4O60885 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
BRD4O60885 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
BRD4O60885 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
BRD4O60885 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC28.59■■■□□ 2.17
BRD4O60885 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
BRD4O60885 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
BRD4O60885 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC28.59■■■□□ 2.17
BRD4O60885 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
BRD4O60885 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
BRD4O60885 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC28.59■■■□□ 2.17
BRD4O60885 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
BRD4O60885 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
BRD4O60885 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
BRD4O60885 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
BRD4O60885 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC28.58■■■□□ 2.17
BRD4O60885 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
BRD4O60885 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC28.58■■■□□ 2.17
BRD4O60885 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
BRD4O60885 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC28.58■■■□□ 2.17
BRD4O60885 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC28.58■■■□□ 2.17
BRD4O60885 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms