Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.28■■□□□ 1
TSPAN3O60637 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TSPAN3O60637 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.28■■□□□ 1
TSPAN3O60637 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.28■■□□□ 1
TSPAN3O60637 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.28■■□□□ 1
TSPAN3O60637 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TSPAN3O60637 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.28■■□□□ 1
TSPAN3O60637 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.28■■□□□ 1
TSPAN3O60637 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.28■■□□□ 1
TSPAN3O60637 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.28■■□□□ 1
TSPAN3O60637 KRT18P6-201ENST00000555540 1265 ntBASIC21.28■■□□□ 1
TSPAN3O60637 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TSPAN3O60637 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.28■■□□□ 1
TSPAN3O60637 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TSPAN3O60637 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TSPAN3O60637 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.27■■□□□ 1
TSPAN3O60637 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.27■■□□□ 1
TSPAN3O60637 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TSPAN3O60637 AL024507.2-201ENST00000606070 2574 ntBASIC21.27■■□□□ 1
TSPAN3O60637 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TSPAN3O60637 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TSPAN3O60637 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TSPAN3O60637 LSM12P1-201ENST00000411836 588 ntBASIC21.27■■□□□ 1
TSPAN3O60637 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TSPAN3O60637 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.27■■□□□ 1
TSPAN3O60637 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.27■■□□□ 1
TSPAN3O60637 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.27■■□□□ 1
TSPAN3O60637 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.27■■□□□ 1
TSPAN3O60637 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.27■■□□□ 1
TSPAN3O60637 AC092118.2-201ENST00000613495 667 ntBASIC21.27■■□□□ 1
TSPAN3O60637 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TSPAN3O60637 KRT17P1-201ENST00000399211 1546 ntBASIC21.27■■□□□ 1
TSPAN3O60637 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TSPAN3O60637 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TSPAN3O60637 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.27■■□□□ 1
TSPAN3O60637 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.27■■□□□ 1
TSPAN3O60637 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TSPAN3O60637 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
TSPAN3O60637 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TSPAN3O60637 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TSPAN3O60637 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TSPAN3O60637 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
TSPAN3O60637 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TSPAN3O60637 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TSPAN3O60637 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TSPAN3O60637 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TSPAN3O60637 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.26■□□□□ 0.99
TSPAN3O60637 AC073210.2-201ENST00000430369 194 ntBASIC21.26■□□□□ 0.99
TSPAN3O60637 CD99P1-205ENST00000527459 561 ntBASIC21.26■□□□□ 0.99
TSPAN3O60637 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.26■□□□□ 0.99
TSPAN3O60637 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.26■□□□□ 0.99
TSPAN3O60637 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TSPAN3O60637 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TSPAN3O60637 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TSPAN3O60637 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TSPAN3O60637 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TSPAN3O60637 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.26■□□□□ 0.99
TSPAN3O60637 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TSPAN3O60637 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TSPAN3O60637 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TSPAN3O60637 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.25■□□□□ 0.99
TSPAN3O60637 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TSPAN3O60637 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TSPAN3O60637 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TSPAN3O60637 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TSPAN3O60637 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TSPAN3O60637 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.25■□□□□ 0.99
TSPAN3O60637 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.25■□□□□ 0.99
TSPAN3O60637 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TSPAN3O60637 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.25■□□□□ 0.99
TSPAN3O60637 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.25■□□□□ 0.99
TSPAN3O60637 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TSPAN3O60637 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.25■□□□□ 0.99
TSPAN3O60637 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TSPAN3O60637 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TSPAN3O60637 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TSPAN3O60637 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
TSPAN3O60637 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TSPAN3O60637 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TSPAN3O60637 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TSPAN3O60637 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.24■□□□□ 0.99
TSPAN3O60637 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.24■□□□□ 0.99
TSPAN3O60637 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TSPAN3O60637 DUSP5P2-201ENST00000426873 1033 ntBASIC21.24■□□□□ 0.99
TSPAN3O60637 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
TSPAN3O60637 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
TSPAN3O60637 CYP2T3P-201ENST00000601990 817 ntBASIC21.24■□□□□ 0.99
TSPAN3O60637 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.24■□□□□ 0.99
TSPAN3O60637 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
TSPAN3O60637 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TSPAN3O60637 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
TSPAN3O60637 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TSPAN3O60637 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TSPAN3O60637 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
TSPAN3O60637 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
TSPAN3O60637 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TSPAN3O60637 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
TSPAN3O60637 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TSPAN3O60637 MCRIP2P1-201ENST00000394346 511 ntBASIC21.23■□□□□ 0.99
TSPAN3O60637 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms