Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
GFRA3O60609 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
GFRA3O60609 KRT16P5-201ENST00000455284 522 ntBASIC20.3■□□□□ 0.84
GFRA3O60609 AC063952.2-201ENST00000498792 1227 ntBASIC20.3■□□□□ 0.84
GFRA3O60609 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.3■□□□□ 0.84
GFRA3O60609 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.3■□□□□ 0.84
GFRA3O60609 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.3■□□□□ 0.84
GFRA3O60609 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GFRA3O60609 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GFRA3O60609 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.29■□□□□ 0.84
GFRA3O60609 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
GFRA3O60609 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.29■□□□□ 0.84
GFRA3O60609 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GFRA3O60609 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.29■□□□□ 0.84
GFRA3O60609 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.29■□□□□ 0.84
GFRA3O60609 AC093458.2-201ENST00000623150 629 ntBASIC20.29■□□□□ 0.84
GFRA3O60609 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.29■□□□□ 0.84
GFRA3O60609 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GFRA3O60609 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.29■□□□□ 0.84
GFRA3O60609 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
GFRA3O60609 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.28■□□□□ 0.84
GFRA3O60609 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GFRA3O60609 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
GFRA3O60609 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GFRA3O60609 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.28■□□□□ 0.84
GFRA3O60609 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.28■□□□□ 0.84
GFRA3O60609 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.28■□□□□ 0.84
GFRA3O60609 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.28■□□□□ 0.84
GFRA3O60609 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.28■□□□□ 0.84
GFRA3O60609 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.28■□□□□ 0.84
GFRA3O60609 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
GFRA3O60609 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.28■□□□□ 0.84
GFRA3O60609 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
GFRA3O60609 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
GFRA3O60609 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
GFRA3O60609 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.27■□□□□ 0.84
GFRA3O60609 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GFRA3O60609 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GFRA3O60609 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.27■□□□□ 0.84
GFRA3O60609 CYP21A1P-202ENST00000354927 1481 ntBASIC20.27■□□□□ 0.84
GFRA3O60609 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GFRA3O60609 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.27■□□□□ 0.84
GFRA3O60609 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
GFRA3O60609 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.27■□□□□ 0.84
GFRA3O60609 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.27■□□□□ 0.84
GFRA3O60609 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
GFRA3O60609 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
GFRA3O60609 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.27■□□□□ 0.84
GFRA3O60609 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.27■□□□□ 0.84
GFRA3O60609 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.27■□□□□ 0.84
GFRA3O60609 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
GFRA3O60609 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.27■□□□□ 0.84
GFRA3O60609 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.27■□□□□ 0.84
GFRA3O60609 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
GFRA3O60609 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.27■□□□□ 0.84
GFRA3O60609 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
GFRA3O60609 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
GFRA3O60609 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
GFRA3O60609 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GFRA3O60609 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.26■□□□□ 0.83
GFRA3O60609 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.26■□□□□ 0.83
GFRA3O60609 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.26■□□□□ 0.83
GFRA3O60609 CLEC4GP1-201ENST00000596555 870 ntBASIC20.26■□□□□ 0.83
GFRA3O60609 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GFRA3O60609 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
GFRA3O60609 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
GFRA3O60609 LINC00526-201ENST00000581067 1875 ntBASIC20.26■□□□□ 0.83
GFRA3O60609 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GFRA3O60609 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
GFRA3O60609 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
GFRA3O60609 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GFRA3O60609 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GFRA3O60609 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
GFRA3O60609 AL031133.1-201ENST00000406807 723 ntBASIC20.25■□□□□ 0.83
GFRA3O60609 AL390719.1-204ENST00000412397 1219 ntBASIC20.25■□□□□ 0.83
GFRA3O60609 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.25■□□□□ 0.83
GFRA3O60609 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GFRA3O60609 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.25■□□□□ 0.83
GFRA3O60609 MYC-208ENST00000641036 567 ntBASIC20.25■□□□□ 0.83
GFRA3O60609 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GFRA3O60609 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GFRA3O60609 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GFRA3O60609 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GFRA3O60609 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
GFRA3O60609 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.24■□□□□ 0.83
GFRA3O60609 LINC01960-201ENST00000563759 1884 ntBASIC20.24■□□□□ 0.83
GFRA3O60609 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
GFRA3O60609 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GFRA3O60609 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
GFRA3O60609 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GFRA3O60609 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GFRA3O60609 HCG4P8-203ENST00000443049 980 ntBASIC20.24■□□□□ 0.83
GFRA3O60609 BX664615.1-201ENST00000443558 458 ntBASIC20.24■□□□□ 0.83
GFRA3O60609 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.24■□□□□ 0.83
GFRA3O60609 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.24■□□□□ 0.83
GFRA3O60609 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GFRA3O60609 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.24■□□□□ 0.83
GFRA3O60609 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.24■□□□□ 0.83
GFRA3O60609 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GFRA3O60609 AL121906.2-201ENST00000621597 723 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms