Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.24■□□□□ 0.83
GDF9O60383 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GDF9O60383 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
GDF9O60383 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
GDF9O60383 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GDF9O60383 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GDF9O60383 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GDF9O60383 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GDF9O60383 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDF9O60383 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.23■□□□□ 0.83
GDF9O60383 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.23■□□□□ 0.83
GDF9O60383 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.23■□□□□ 0.83
GDF9O60383 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.23■□□□□ 0.83
GDF9O60383 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.23■□□□□ 0.83
GDF9O60383 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.23■□□□□ 0.83
GDF9O60383 MIR6786-201ENST00000616843 113 ntBASIC20.23■□□□□ 0.83
GDF9O60383 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.23■□□□□ 0.83
GDF9O60383 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDF9O60383 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.23■□□□□ 0.83
GDF9O60383 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.23■□□□□ 0.83
GDF9O60383 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
GDF9O60383 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDF9O60383 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDF9O60383 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDF9O60383 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GDF9O60383 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GDF9O60383 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.22■□□□□ 0.83
GDF9O60383 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.22■□□□□ 0.83
GDF9O60383 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GDF9O60383 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.22■□□□□ 0.83
GDF9O60383 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.22■□□□□ 0.83
GDF9O60383 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDF9O60383 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.21■□□□□ 0.83
GDF9O60383 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.21■□□□□ 0.83
GDF9O60383 AC003102.1-202ENST00000563394 1796 ntBASIC20.21■□□□□ 0.83
GDF9O60383 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.21■□□□□ 0.83
GDF9O60383 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.21■□□□□ 0.83
GDF9O60383 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GDF9O60383 AC005521.1-201ENST00000393351 872 ntBASIC20.21■□□□□ 0.83
GDF9O60383 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.21■□□□□ 0.83
GDF9O60383 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GDF9O60383 AC105020.6-201ENST00000621523 1217 ntBASIC20.21■□□□□ 0.83
GDF9O60383 CYP21A1P-202ENST00000354927 1481 ntBASIC20.21■□□□□ 0.83
GDF9O60383 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.21■□□□□ 0.83
GDF9O60383 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GDF9O60383 AC139530.1-201ENST00000575312 1977 ntBASIC20.21■□□□□ 0.83
GDF9O60383 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
GDF9O60383 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GDF9O60383 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.2■□□□□ 0.82
GDF9O60383 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GDF9O60383 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
GDF9O60383 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
GDF9O60383 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GDF9O60383 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GDF9O60383 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
GDF9O60383 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
GDF9O60383 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.2■□□□□ 0.82
GDF9O60383 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
GDF9O60383 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.2■□□□□ 0.82
GDF9O60383 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
GDF9O60383 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.2■□□□□ 0.82
GDF9O60383 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.2■□□□□ 0.82
GDF9O60383 AC005363.2-201ENST00000618631 242 ntBASIC20.2■□□□□ 0.82
GDF9O60383 AC006557.6-201ENST00000623071 864 ntBASIC20.2■□□□□ 0.82
GDF9O60383 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
GDF9O60383 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GDF9O60383 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
GDF9O60383 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.2■□□□□ 0.82
GDF9O60383 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GDF9O60383 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
GDF9O60383 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GDF9O60383 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GDF9O60383 AC007322.3-201ENST00000426526 701 ntBASIC20.19■□□□□ 0.82
GDF9O60383 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.19■□□□□ 0.82
GDF9O60383 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GDF9O60383 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
GDF9O60383 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GDF9O60383 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.19■□□□□ 0.82
GDF9O60383 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GDF9O60383 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.19■□□□□ 0.82
GDF9O60383 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GDF9O60383 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GDF9O60383 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.18■□□□□ 0.82
GDF9O60383 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GDF9O60383 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
GDF9O60383 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
GDF9O60383 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.18■□□□□ 0.82
GDF9O60383 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.18■□□□□ 0.82
GDF9O60383 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.18■□□□□ 0.82
GDF9O60383 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.18■□□□□ 0.82
GDF9O60383 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.18■□□□□ 0.82
GDF9O60383 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.18■□□□□ 0.82
GDF9O60383 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.18■□□□□ 0.82
GDF9O60383 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.18■□□□□ 0.82
GDF9O60383 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.18■□□□□ 0.82
GDF9O60383 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GDF9O60383 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GDF9O60383 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GDF9O60383 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GDF9O60383 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms