Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.29■□□□□ 0.84
VEGFDO43915 AC121338.2-201ENST00000622535 1744 ntBASIC20.29■□□□□ 0.84
VEGFDO43915 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VEGFDO43915 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VEGFDO43915 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
VEGFDO43915 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
VEGFDO43915 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VEGFDO43915 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.29■□□□□ 0.84
VEGFDO43915 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VEGFDO43915 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.28■□□□□ 0.84
VEGFDO43915 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
VEGFDO43915 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.28■□□□□ 0.84
VEGFDO43915 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.28■□□□□ 0.84
VEGFDO43915 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.28■□□□□ 0.84
VEGFDO43915 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.28■□□□□ 0.84
VEGFDO43915 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.28■□□□□ 0.84
VEGFDO43915 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VEGFDO43915 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VEGFDO43915 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
VEGFDO43915 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.27■□□□□ 0.84
VEGFDO43915 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.27■□□□□ 0.84
VEGFDO43915 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VEGFDO43915 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VEGFDO43915 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VEGFDO43915 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
VEGFDO43915 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VEGFDO43915 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VEGFDO43915 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VEGFDO43915 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
VEGFDO43915 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
VEGFDO43915 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
VEGFDO43915 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VEGFDO43915 MIPEPP3-201ENST00000412105 444 ntBASIC20.27■□□□□ 0.84
VEGFDO43915 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.27■□□□□ 0.84
VEGFDO43915 AC142086.2-201ENST00000569753 217 ntBASIC20.27■□□□□ 0.84
VEGFDO43915 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.27■□□□□ 0.84
VEGFDO43915 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VEGFDO43915 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
VEGFDO43915 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
VEGFDO43915 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
VEGFDO43915 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
VEGFDO43915 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.27■□□□□ 0.83
VEGFDO43915 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
VEGFDO43915 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VEGFDO43915 CYP21A1P-202ENST00000354927 1481 ntBASIC20.26■□□□□ 0.83
VEGFDO43915 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VEGFDO43915 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VEGFDO43915 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VEGFDO43915 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VEGFDO43915 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
VEGFDO43915 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.26■□□□□ 0.83
VEGFDO43915 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VEGFDO43915 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
VEGFDO43915 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.26■□□□□ 0.83
VEGFDO43915 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VEGFDO43915 MIR4758-201ENST00000577688 71 ntBASIC20.26■□□□□ 0.83
VEGFDO43915 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.26■□□□□ 0.83
VEGFDO43915 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.26■□□□□ 0.83
VEGFDO43915 CYP2T3P-201ENST00000601990 817 ntBASIC20.26■□□□□ 0.83
VEGFDO43915 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
VEGFDO43915 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VEGFDO43915 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.26■□□□□ 0.83
VEGFDO43915 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
VEGFDO43915 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
VEGFDO43915 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.26■□□□□ 0.83
VEGFDO43915 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VEGFDO43915 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VEGFDO43915 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VEGFDO43915 AF106564.1-201ENST00000607058 2553 ntBASIC20.25■□□□□ 0.83
VEGFDO43915 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VEGFDO43915 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VEGFDO43915 AL355802.2-201ENST00000402069 882 ntBASIC20.25■□□□□ 0.83
VEGFDO43915 BX276092.2-201ENST00000417668 665 ntBASIC20.25■□□□□ 0.83
VEGFDO43915 PGM5P4-201ENST00000421970 445 ntBASIC20.25■□□□□ 0.83
VEGFDO43915 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.25■□□□□ 0.83
VEGFDO43915 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.25■□□□□ 0.83
VEGFDO43915 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.25■□□□□ 0.83
VEGFDO43915 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.25■□□□□ 0.83
VEGFDO43915 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
VEGFDO43915 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VEGFDO43915 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
VEGFDO43915 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.25■□□□□ 0.83
VEGFDO43915 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VEGFDO43915 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VEGFDO43915 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VEGFDO43915 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
VEGFDO43915 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VEGFDO43915 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.24■□□□□ 0.83
VEGFDO43915 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.24■□□□□ 0.83
VEGFDO43915 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VEGFDO43915 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VEGFDO43915 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VEGFDO43915 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VEGFDO43915 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.24■□□□□ 0.83
VEGFDO43915 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.24■□□□□ 0.83
VEGFDO43915 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VEGFDO43915 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VEGFDO43915 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
VEGFDO43915 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
VEGFDO43915 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms