Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.98■□□□□ 0.95
KDELR3O43731 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KDELR3O43731 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
KDELR3O43731 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
KDELR3O43731 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KDELR3O43731 HLA-L-209ENST00000420110 1011 ntBASIC20.98■□□□□ 0.95
KDELR3O43731 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.98■□□□□ 0.95
KDELR3O43731 GUSBP6-202ENST00000438529 1198 ntBASIC20.98■□□□□ 0.95
KDELR3O43731 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.98■□□□□ 0.95
KDELR3O43731 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.98■□□□□ 0.95
KDELR3O43731 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.98■□□□□ 0.95
KDELR3O43731 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.98■□□□□ 0.95
KDELR3O43731 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KDELR3O43731 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KDELR3O43731 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KDELR3O43731 MKRN4P-201ENST00000444706 1521 ntBASIC20.98■□□□□ 0.95
KDELR3O43731 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KDELR3O43731 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KDELR3O43731 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KDELR3O43731 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.97■□□□□ 0.95
KDELR3O43731 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.97■□□□□ 0.95
KDELR3O43731 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
KDELR3O43731 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
KDELR3O43731 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KDELR3O43731 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
KDELR3O43731 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.97■□□□□ 0.95
KDELR3O43731 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
KDELR3O43731 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
KDELR3O43731 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.97■□□□□ 0.95
KDELR3O43731 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.97■□□□□ 0.95
KDELR3O43731 AC104771.1-201ENST00000603335 964 ntBASIC20.97■□□□□ 0.95
KDELR3O43731 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
KDELR3O43731 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
KDELR3O43731 PLK5-205ENST00000642079 1969 ntBASIC20.97■□□□□ 0.95
KDELR3O43731 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.97■□□□□ 0.95
KDELR3O43731 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
KDELR3O43731 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KDELR3O43731 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KDELR3O43731 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.96■□□□□ 0.95
KDELR3O43731 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KDELR3O43731 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
KDELR3O43731 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KDELR3O43731 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KDELR3O43731 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.96■□□□□ 0.95
KDELR3O43731 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
KDELR3O43731 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
KDELR3O43731 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.96■□□□□ 0.95
KDELR3O43731 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
KDELR3O43731 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KDELR3O43731 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KDELR3O43731 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.96■□□□□ 0.95
KDELR3O43731 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
KDELR3O43731 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KDELR3O43731 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KDELR3O43731 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
KDELR3O43731 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KDELR3O43731 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
KDELR3O43731 MCRIP2P1-201ENST00000394346 511 ntBASIC20.95■□□□□ 0.94
KDELR3O43731 SLC29A4P1-201ENST00000398760 971 ntBASIC20.95■□□□□ 0.94
KDELR3O43731 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.95■□□□□ 0.94
KDELR3O43731 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.95■□□□□ 0.94
KDELR3O43731 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.95■□□□□ 0.94
KDELR3O43731 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
KDELR3O43731 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.95■□□□□ 0.94
KDELR3O43731 CYP21A1P-202ENST00000354927 1481 ntBASIC20.94■□□□□ 0.94
KDELR3O43731 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KDELR3O43731 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KDELR3O43731 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KDELR3O43731 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
KDELR3O43731 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
KDELR3O43731 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.94■□□□□ 0.94
KDELR3O43731 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.94■□□□□ 0.94
KDELR3O43731 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KDELR3O43731 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.94■□□□□ 0.94
KDELR3O43731 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.94■□□□□ 0.94
KDELR3O43731 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.94■□□□□ 0.94
KDELR3O43731 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
KDELR3O43731 AC027702.1-201ENST00000563810 1770 ntBASIC20.94■□□□□ 0.94
KDELR3O43731 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
KDELR3O43731 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KDELR3O43731 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KDELR3O43731 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KDELR3O43731 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.93■□□□□ 0.94
KDELR3O43731 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
KDELR3O43731 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KDELR3O43731 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KDELR3O43731 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KDELR3O43731 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KDELR3O43731 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KDELR3O43731 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
KDELR3O43731 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.93■□□□□ 0.94
KDELR3O43731 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.93■□□□□ 0.94
KDELR3O43731 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.93■□□□□ 0.94
KDELR3O43731 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.93■□□□□ 0.94
KDELR3O43731 CYP2T3P-201ENST00000601990 817 ntBASIC20.93■□□□□ 0.94
KDELR3O43731 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.93■□□□□ 0.94
KDELR3O43731 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
KDELR3O43731 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
KDELR3O43731 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.93■□□□□ 0.94
KDELR3O43731 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms