Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SNAI2O43623 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC15.35■□□□□ 0.05
SNAI2O43623 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
SNAI2O43623 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SNAI2O43623 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
SNAI2O43623 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SNAI2O43623 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
SNAI2O43623 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SNAI2O43623 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SNAI2O43623 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SNAI2O43623 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SNAI2O43623 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SNAI2O43623 CREM-229ENST00000474362 1030 ntTSL 2 BASIC15.35■□□□□ 0.05
SNAI2O43623 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SNAI2O43623 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SNAI2O43623 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SNAI2O43623 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SNAI2O43623 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SNAI2O43623 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SNAI2O43623 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
SNAI2O43623 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SNAI2O43623 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
SNAI2O43623 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SNAI2O43623 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SNAI2O43623 PLK5-205ENST00000642079 1969 ntBASIC15.35■□□□□ 0.05
SNAI2O43623 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.35■□□□□ 0.05
SNAI2O43623 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNAI2O43623 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNAI2O43623 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNAI2O43623 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNAI2O43623 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SNAI2O43623 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNAI2O43623 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNAI2O43623 NARF-205ENST00000412079 1760 ntTSL 5 BASIC15.34■□□□□ 0.05
SNAI2O43623 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC15.34■□□□□ 0.05
SNAI2O43623 AC020763.4-201ENST00000623414 4170 ntBASIC15.34■□□□□ 0.05
SNAI2O43623 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SNAI2O43623 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SNAI2O43623 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNAI2O43623 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
SNAI2O43623 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNAI2O43623 AC009299.2-201ENST00000482477 511 ntBASIC15.34■□□□□ 0.05
SNAI2O43623 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.34■□□□□ 0.05
SNAI2O43623 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
SNAI2O43623 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNAI2O43623 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNAI2O43623 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNAI2O43623 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.34■□□□□ 0.05
SNAI2O43623 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNAI2O43623 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNAI2O43623 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNAI2O43623 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNAI2O43623 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNAI2O43623 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.34■□□□□ 0.05
SNAI2O43623 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNAI2O43623 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC15.34■□□□□ 0.05
SNAI2O43623 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNAI2O43623 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SNAI2O43623 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.33■□□□□ 0.05
SNAI2O43623 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SNAI2O43623 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SNAI2O43623 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SNAI2O43623 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SNAI2O43623 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.33■□□□□ 0.05
SNAI2O43623 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNAI2O43623 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SNAI2O43623 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNAI2O43623 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNAI2O43623 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNAI2O43623 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNAI2O43623 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNAI2O43623 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SNAI2O43623 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC15.33■□□□□ 0.04
SNAI2O43623 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.33■□□□□ 0.04
SNAI2O43623 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SNAI2O43623 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SNAI2O43623 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SNAI2O43623 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNAI2O43623 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNAI2O43623 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC15.33■□□□□ 0.04
SNAI2O43623 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
SNAI2O43623 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNAI2O43623 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNAI2O43623 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SNAI2O43623 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNAI2O43623 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SNAI2O43623 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNAI2O43623 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNAI2O43623 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SNAI2O43623 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNAI2O43623 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SNAI2O43623 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.33■□□□□ 0.04
SNAI2O43623 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
SNAI2O43623 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SNAI2O43623 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNAI2O43623 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNAI2O43623 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SNAI2O43623 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNAI2O43623 STX5-203ENST00000394690 1568 ntTSL 5 BASIC15.32■□□□□ 0.04
SNAI2O43623 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms