Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
ABCC4O15439 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC26.34■■□□□ 1.81
ABCC4O15439 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
ABCC4O15439 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
ABCC4O15439 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
ABCC4O15439 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC26.34■■□□□ 1.81
ABCC4O15439 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ABCC4O15439 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
ABCC4O15439 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC26.34■■□□□ 1.81
ABCC4O15439 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC26.34■■□□□ 1.81
ABCC4O15439 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ABCC4O15439 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ABCC4O15439 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC26.33■■□□□ 1.81
ABCC4O15439 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ABCC4O15439 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ABCC4O15439 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ABCC4O15439 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC26.33■■□□□ 1.81
ABCC4O15439 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC26.33■■□□□ 1.81
ABCC4O15439 AC091799.1-201ENST00000422823 811 ntBASIC26.33■■□□□ 1.81
ABCC4O15439 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC26.33■■□□□ 1.81
ABCC4O15439 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC26.33■■□□□ 1.81
ABCC4O15439 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
ABCC4O15439 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
ABCC4O15439 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
ABCC4O15439 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
ABCC4O15439 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.8
ABCC4O15439 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ABCC4O15439 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
ABCC4O15439 AL512625.2-201ENST00000417533 625 ntBASIC26.32■■□□□ 1.8
ABCC4O15439 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ABCC4O15439 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC26.32■■□□□ 1.8
ABCC4O15439 AC069236.1-201ENST00000604339 616 ntBASIC26.32■■□□□ 1.8
ABCC4O15439 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ABCC4O15439 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ABCC4O15439 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ABCC4O15439 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ABCC4O15439 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC26.31■■□□□ 1.8
ABCC4O15439 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ABCC4O15439 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ABCC4O15439 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
ABCC4O15439 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC26.31■■□□□ 1.8
ABCC4O15439 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ABCC4O15439 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC26.31■■□□□ 1.8
ABCC4O15439 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC26.31■■□□□ 1.8
ABCC4O15439 ITM2C-210ENST00000620962 501 ntBASIC26.31■■□□□ 1.8
ABCC4O15439 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
ABCC4O15439 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ABCC4O15439 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ABCC4O15439 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ABCC4O15439 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC26.31■■□□□ 1.8
ABCC4O15439 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ABCC4O15439 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ABCC4O15439 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ABCC4O15439 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC26.3■■□□□ 1.8
ABCC4O15439 PTPA-214ENST00000423100 988 ntTSL 2 BASIC26.3■■□□□ 1.8
ABCC4O15439 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ABCC4O15439 CD44-222ENST00000526025 1052 ntTSL 2 BASIC26.3■■□□□ 1.8
ABCC4O15439 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC26.3■■□□□ 1.8
ABCC4O15439 AC083880.1-201ENST00000608266 535 ntBASIC26.3■■□□□ 1.8
ABCC4O15439 AC008694.1-202ENST00000636953 945 ntBASIC26.3■■□□□ 1.8
ABCC4O15439 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC26.3■■□□□ 1.8
ABCC4O15439 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ABCC4O15439 PLK5-205ENST00000642079 1969 ntBASIC26.3■■□□□ 1.8
ABCC4O15439 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
ABCC4O15439 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
ABCC4O15439 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC26.29■■□□□ 1.8
ABCC4O15439 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC26.29■■□□□ 1.8
ABCC4O15439 BX276092.2-201ENST00000417668 665 ntBASIC26.29■■□□□ 1.8
ABCC4O15439 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
ABCC4O15439 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC26.29■■□□□ 1.8
ABCC4O15439 DET1-205ENST00000558413 583 ntTSL 4 BASIC26.29■■□□□ 1.8
ABCC4O15439 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
ABCC4O15439 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ABCC4O15439 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC26.29■■□□□ 1.8
ABCC4O15439 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC26.29■■□□□ 1.8
ABCC4O15439 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
ABCC4O15439 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ABCC4O15439 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC26.28■■□□□ 1.8
ABCC4O15439 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC26.28■■□□□ 1.8
ABCC4O15439 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC26.28■■□□□ 1.8
ABCC4O15439 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
ABCC4O15439 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
ABCC4O15439 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC26.28■■□□□ 1.8
ABCC4O15439 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ABCC4O15439 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
ABCC4O15439 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ABCC4O15439 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
ABCC4O15439 USP48-205ENST00000421625 2818 ntTSL 2 BASIC26.27■■□□□ 1.8
ABCC4O15439 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ABCC4O15439 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC26.27■■□□□ 1.8
ABCC4O15439 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC26.27■■□□□ 1.8
ABCC4O15439 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC26.27■■□□□ 1.8
ABCC4O15439 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ABCC4O15439 PRORSD1P-201ENST00000295112 541 ntBASIC26.27■■□□□ 1.8
ABCC4O15439 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ABCC4O15439 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ABCC4O15439 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC26.27■■□□□ 1.8
ABCC4O15439 AC093827.2-201ENST00000512654 315 ntBASIC26.27■■□□□ 1.8
ABCC4O15439 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC26.27■■□□□ 1.8
ABCC4O15439 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms