Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.121e-6■■□□□ 12
NKRFO15226 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.091e-6■■□□□ 12
NKRFO15226 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.081e-6■■□□□ 12
NKRFO15226 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.071e-6■■□□□ 12
NKRFO15226 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.041e-6■■□□□ 12
NKRFO15226 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.161e-6■■□□□ 12
NKRFO15226 CAMKK2-216ENST00000545538 3797 ntTSL 1 (best) BASIC12.51□□□□□ -0.411e-6■■□□□ 12
NKRFO15226 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.271e-10■■□□□ 12
NKRFO15226 CDK19-208ENST00000497709 1117 ntTSL 317.7■□□□□ 0.429e-8■■□□□ 12
NKRFO15226 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.419e-8■■□□□ 12
NKRFO15226 CDK19-205ENST00000460913 448 ntTSL 514.82□□□□□ -0.049e-8■■□□□ 12
NKRFO15226 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC8.37□□□□□ -1.079e-8■■□□□ 12
NKRFO15226 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.7□□□□□ -1.189e-8■■□□□ 12
NKRFO15226 BCAR1-222ENST00000569340 714 ntTSL 315.32■□□□□ 0.047e-7■■□□□ 12
NKRFO15226 FOXK2-202ENST00000473637 3462 ntTSL 1 (best)21.92■■□□□ 1.11e-6■■□□□ 12
NKRFO15226 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.081e-6■■□□□ 12
NKRFO15226 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.35■□□□□ 0.375e-7■■□□□ 12
NKRFO15226 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.235e-7■■□□□ 12
NKRFO15226 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.125e-7■■□□□ 12
NKRFO15226 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.96■■□□□ 1.592e-6■■□□□ 12
NKRFO15226 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.282e-6■■□□□ 12
NKRFO15226 KCNIP2-205ENST00000355657 2617 ntTSL 223.03■■□□□ 1.282e-6■■□□□ 12
NKRFO15226 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.37■□□□□ 0.692e-6■■□□□ 12
NKRFO15226 KCNIP2-204ENST00000353068 684 ntTSL 1 (best) BASIC11.04□□□□□ -0.642e-6■■□□□ 12
NKRFO15226 KCNIP2-201ENST00000239117 555 ntTSL 1 (best)10.99□□□□□ -0.652e-6■■□□□ 12
NKRFO15226 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.932e-6■■□□□ 12
NKRFO15226 KCNIP2-212ENST00000472764 847 ntTSL 59.07□□□□□ -0.962e-6■■□□□ 12
NKRFO15226 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC8.27□□□□□ -1.092e-6■■□□□ 12
NKRFO15226 AC092127.1-201ENST00000567093 3455 ntBASIC17.63■□□□□ 0.412e-7■■□□□ 12
NKRFO15226 RPH3AL-212ENST00000573780 531 ntTSL 416.87■□□□□ 0.291e-6■■□□□ 12
NKRFO15226 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC23.65■■□□□ 1.383e-7■■□□□ 12
NKRFO15226 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.55■■□□□ 1.043e-7■■□□□ 12
NKRFO15226 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20■□□□□ 0.793e-7■■□□□ 12
NKRFO15226 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.95■□□□□ 0.783e-7■■□□□ 12
NKRFO15226 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.8■□□□□ 0.63e-7■■□□□ 12
NKRFO15226 NAA60-215ENST00000572739 803 ntTSL 417.95■□□□□ 0.463e-7■■□□□ 12
NKRFO15226 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.273e-7■■□□□ 12
NKRFO15226 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.233e-7■■□□□ 12
NKRFO15226 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.223e-7■■□□□ 12
NKRFO15226 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC15.56■□□□□ 0.083e-7■■□□□ 12
NKRFO15226 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC14.03□□□□□ -0.163e-7■■□□□ 12
NKRFO15226 NAA60-219ENST00000573345 608 ntTSL 413.83□□□□□ -0.23e-7■■□□□ 12
NKRFO15226 NAA60-212ENST00000572131 558 ntTSL 513.66□□□□□ -0.223e-7■■□□□ 12
NKRFO15226 NAA60-209ENST00000571107 561 ntTSL 413.66□□□□□ -0.223e-7■■□□□ 12
NKRFO15226 NAA60-207ENST00000570551 673 ntTSL 313.37□□□□□ -0.273e-7■■□□□ 12
NKRFO15226 AC025283.2-202ENST00000575785 560 ntTSL 413.24□□□□□ -0.293e-7■■□□□ 12
NKRFO15226 NAA60-224ENST00000574328 552 ntTSL 413.13□□□□□ -0.313e-7■■□□□ 12
NKRFO15226 NAA60-230ENST00000575733 700 ntTSL 412.73□□□□□ -0.373e-7■■□□□ 12
NKRFO15226 NAA60-233ENST00000576787 570 ntTSL 412.62□□□□□ -0.393e-7■■□□□ 12
NKRFO15226 NAA60-221ENST00000573593 565 ntTSL 412.02□□□□□ -0.493e-7■■□□□ 12
NKRFO15226 NAA60-220ENST00000573580 758 ntTSL 4 BASIC11.87□□□□□ -0.513e-7■■□□□ 12
NKRFO15226 NAA60-218ENST00000573201 657 ntTSL 311.72□□□□□ -0.533e-7■■□□□ 12
NKRFO15226 NAA60-206ENST00000570372 398 ntTSL 511.68□□□□□ -0.543e-7■■□□□ 12
NKRFO15226 NAA60-227ENST00000574950 584 ntTSL 411.64□□□□□ -0.553e-7■■□□□ 12
NKRFO15226 NAA60-210ENST00000571696 626 ntTSL 410.51□□□□□ -0.733e-7■■□□□ 12
NKRFO15226 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC9.82□□□□□ -0.843e-7■■□□□ 12
NKRFO15226 NAA60-225ENST00000574380 578 ntTSL 48.65□□□□□ -1.023e-7■■□□□ 12
NKRFO15226 NAA60-216ENST00000572757 818 ntTSL 28.18□□□□□ -1.13e-7■■□□□ 12
NKRFO15226 NAA60-232ENST00000575936 547 ntTSL 47.63□□□□□ -1.193e-7■■□□□ 12
NKRFO15226 NAA60-213ENST00000572169 582 ntTSL 27.36□□□□□ -1.233e-7■■□□□ 12
NKRFO15226 CHST15-202ENST00000435907 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.323e-7■■□□□ 12
NKRFO15226 ANKRD11-207ENST00000562816 573 ntTSL 413.45□□□□□ -0.266e-7■■□□□ 12
NKRFO15226 SREBF1-206ENST00000423161 1058 ntTSL 321.6■■□□□ 1.052e-6■■□□□ 12
NKRFO15226 SREBF1-211ENST00000476994 591 ntTSL 219.82■□□□□ 0.762e-6■■□□□ 12
NKRFO15226 SREBF1-222ENST00000583732 580 ntTSL 417.72■□□□□ 0.432e-6■■□□□ 12
NKRFO15226 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.793e-9■■□□□ 12
NKRFO15226 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.28■■□□□ 1.484e-10■■□□□ 12
NKRFO15226 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.573e-7■■□□□ 12
NKRFO15226 DSP-201ENST00000379802 9796 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.743e-7■■□□□ 12
NKRFO15226 CAPN15-206ENST00000568402 540 ntTSL 416.63■□□□□ 0.255e-8■■□□□ 12
NKRFO15226 TAF4-207ENST00000608887 284 ntTSL 411.11□□□□□ -0.632e-6■■□□□ 12
NKRFO15226 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.9□□□□□ -1.155e-6■■□□□ 12
NKRFO15226 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.672e-10■■□□□ 12
NKRFO15226 QSER1-203ENST00000527250 448 ntTSL 34□□□□□ -1.772e-10■■□□□ 12
NKRFO15226 LZTS2-205ENST00000454422 804 ntTSL 236.14■■■■□ 3.388e-7■■□□□ 12
NKRFO15226 MAP3K11-206ENST00000527304 5605 nt17.76■□□□□ 0.433e-8■■□□□ 12
NKRFO15226 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.423e-8■■□□□ 12
NKRFO15226 MAP3K11-204ENST00000526293 571 ntTSL 417.45■□□□□ 0.383e-8■■□□□ 12
NKRFO15226 MAP3K11-203ENST00000524856 3787 ntTSL 216.42■□□□□ 0.223e-8■■□□□ 12
NKRFO15226 MAP3K11-207ENST00000529839 561 ntTSL 416.28■□□□□ 0.23e-8■■□□□ 12
NKRFO15226 TBL1X-205ENST00000422314 496 ntTSL 227.5■■□□□ 1.992e-6■■□□□ 12
NKRFO15226 STAT5B-203ENST00000468312 1799 ntTSL 1 (best)25.46■■□□□ 1.673e-6■■□□□ 12
NKRFO15226 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.233e-6■■□□□ 12
NKRFO15226 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.163e-6■■□□□ 12
NKRFO15226 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.013e-6■■□□□ 12
NKRFO15226 STAT5B-202ENST00000415845 559 ntTSL 47.65□□□□□ -1.183e-6■■□□□ 12
NKRFO15226 ACAP3-210ENST00000478065 2393 ntTSL 321.79■■□□□ 1.082e-6■■□□□ 12
NKRFO15226 EHMT2-208ENST00000465429 1454 ntTSL 229.05■■■□□ 2.242e-7■■□□□ 12
NKRFO15226 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC25.13■■□□□ 1.616e-7■■□□□ 12
NKRFO15226 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.256e-7■■□□□ 12
NKRFO15226 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.186e-7■■□□□ 12
NKRFO15226 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.85■■□□□ 1.096e-7■■□□□ 12
NKRFO15226 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.012e-7■■□□□ 12
NKRFO15226 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -02e-7■■□□□ 12
NKRFO15226 NEK6-213ENST00000540326 2578 ntTSL 1 (best) BASIC13.93□□□□□ -0.181e-6■■□□□ 11.9
NKRFO15226 NEK6-203ENST00000373600 3619 ntTSL 1 (best) BASIC13.14□□□□□ -0.311e-6■■□□□ 11.9
NKRFO15226 NEK6-201ENST00000320246 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.361e-6■■□□□ 11.9
NKRFO15226 NEK6-204ENST00000373603 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.751e-6■■□□□ 11.9
NKRFO15226 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.38■■□□□ 1.334e-7■■□□□ 11.9
NKRFO15226 LINC01089-201ENST00000428029 1024 ntTSL 221.97■■□□□ 1.114e-7■■□□□ 11.9
Retrieved 100 of 9,198 protein–RNA pairs in 176.8 ms