Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TRIM38O00635 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM38O00635 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TRIM38O00635 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM38O00635 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM38O00635 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM38O00635 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM38O00635 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM38O00635 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TRIM38O00635 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM38O00635 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM38O00635 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM38O00635 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM38O00635 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRIM38O00635 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM38O00635 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM38O00635 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM38O00635 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.69■□□□□ 0.9
TRIM38O00635 AC007322.4-201ENST00000509611 723 ntBASIC20.69■□□□□ 0.9
TRIM38O00635 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM38O00635 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM38O00635 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM38O00635 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM38O00635 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM38O00635 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM38O00635 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM38O00635 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM38O00635 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM38O00635 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM38O00635 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM38O00635 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
TRIM38O00635 MKRN4P-201ENST00000444706 1521 ntBASIC20.68■□□□□ 0.9
TRIM38O00635 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM38O00635 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM38O00635 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM38O00635 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TRIM38O00635 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM38O00635 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM38O00635 AC093787.1-201ENST00000450396 207 ntBASIC20.68■□□□□ 0.9
TRIM38O00635 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.68■□□□□ 0.9
TRIM38O00635 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM38O00635 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM38O00635 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM38O00635 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM38O00635 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM38O00635 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TRIM38O00635 FEM1AP4-201ENST00000443167 1987 ntBASIC20.68■□□□□ 0.9
TRIM38O00635 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
TRIM38O00635 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM38O00635 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
TRIM38O00635 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM38O00635 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM38O00635 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM38O00635 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM38O00635 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM38O00635 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM38O00635 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.67■□□□□ 0.9
TRIM38O00635 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.67■□□□□ 0.9
TRIM38O00635 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM38O00635 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM38O00635 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM38O00635 AC016405.3-201ENST00000607710 860 ntBASIC20.67■□□□□ 0.9
TRIM38O00635 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM38O00635 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM38O00635 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM38O00635 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM38O00635 LINC01521-201ENST00000504184 1943 ntBASIC20.66■□□□□ 0.9
TRIM38O00635 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM38O00635 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.66■□□□□ 0.9
TRIM38O00635 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM38O00635 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM38O00635 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM38O00635 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TRIM38O00635 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.66■□□□□ 0.9
TRIM38O00635 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM38O00635 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM38O00635 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM38O00635 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM38O00635 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM38O00635 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.66■□□□□ 0.9
TRIM38O00635 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM38O00635 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
TRIM38O00635 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM38O00635 OR10C1-204ENST00000622521 1039 ntBASIC20.66■□□□□ 0.9
TRIM38O00635 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.66■□□□□ 0.9
TRIM38O00635 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM38O00635 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM38O00635 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM38O00635 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM38O00635 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.66■□□□□ 0.9
TRIM38O00635 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.66■□□□□ 0.9
TRIM38O00635 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
TRIM38O00635 AF106564.1-201ENST00000607058 2553 ntBASIC20.66■□□□□ 0.9
TRIM38O00635 AL157384.1-201ENST00000445995 2473 ntBASIC20.65■□□□□ 0.9
TRIM38O00635 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM38O00635 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM38O00635 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TRIM38O00635 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM38O00635 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRIM38O00635 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms