Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 RPS2P55-201ENST00000397318 883 ntBASIC17.15■□□□□ 0.34
RNF223E7ERA6 AC012618.2-201ENST00000428058 849 ntBASIC17.15■□□□□ 0.34
RNF223E7ERA6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF223E7ERA6 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.15■□□□□ 0.34
RNF223E7ERA6 AC107956.1-201ENST00000494359 873 ntBASIC17.15■□□□□ 0.34
RNF223E7ERA6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
RNF223E7ERA6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF223E7ERA6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RNF223E7ERA6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RNF223E7ERA6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF223E7ERA6 KRT17P2-201ENST00000300992 1314 ntBASIC17.15■□□□□ 0.34
RNF223E7ERA6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF223E7ERA6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF223E7ERA6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF223E7ERA6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RNF223E7ERA6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF223E7ERA6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF223E7ERA6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.15■□□□□ 0.34
RNF223E7ERA6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RNF223E7ERA6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.14■□□□□ 0.34
RNF223E7ERA6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF223E7ERA6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF223E7ERA6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF223E7ERA6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF223E7ERA6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF223E7ERA6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.14■□□□□ 0.33
RNF223E7ERA6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF223E7ERA6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF223E7ERA6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF223E7ERA6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.14■□□□□ 0.33
RNF223E7ERA6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF223E7ERA6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF223E7ERA6 AC233702.5-201ENST00000584107 538 ntBASIC17.14■□□□□ 0.33
RNF223E7ERA6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.14■□□□□ 0.33
RNF223E7ERA6 AL023875.1-201ENST00000640777 796 ntBASIC17.14■□□□□ 0.33
RNF223E7ERA6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF223E7ERA6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF223E7ERA6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF223E7ERA6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RNF223E7ERA6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF223E7ERA6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF223E7ERA6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF223E7ERA6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF223E7ERA6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF223E7ERA6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF223E7ERA6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF223E7ERA6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF223E7ERA6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF223E7ERA6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF223E7ERA6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF223E7ERA6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF223E7ERA6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF223E7ERA6 AC068473.5-201ENST00000616428 2072 ntBASIC17.13■□□□□ 0.33
RNF223E7ERA6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF223E7ERA6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF223E7ERA6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF223E7ERA6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF223E7ERA6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF223E7ERA6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF223E7ERA6 SERPINA7P1-201ENST00000443077 631 ntBASIC17.13■□□□□ 0.33
RNF223E7ERA6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF223E7ERA6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
RNF223E7ERA6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF223E7ERA6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF223E7ERA6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF223E7ERA6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RNF223E7ERA6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF223E7ERA6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF223E7ERA6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF223E7ERA6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
RNF223E7ERA6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF223E7ERA6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF223E7ERA6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF223E7ERA6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF223E7ERA6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF223E7ERA6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RNF223E7ERA6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF223E7ERA6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RNF223E7ERA6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF223E7ERA6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF223E7ERA6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF223E7ERA6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RNF223E7ERA6 AC239809.2-201ENST00000415381 517 ntBASIC17.12■□□□□ 0.33
RNF223E7ERA6 C2orf69P4-201ENST00000565394 541 ntBASIC17.12■□□□□ 0.33
RNF223E7ERA6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF223E7ERA6 MTDHP1-201ENST00000605323 784 ntBASIC17.12■□□□□ 0.33
RNF223E7ERA6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF223E7ERA6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF223E7ERA6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RNF223E7ERA6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RNF223E7ERA6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF223E7ERA6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF223E7ERA6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF223E7ERA6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF223E7ERA6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RNF223E7ERA6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF223E7ERA6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RNF223E7ERA6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF223E7ERA6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF223E7ERA6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms