Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 RNF165-205ENST00000588679 2904 ntBASIC19.21■□□□□ 0.67
CLCA1A8K7I4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA1A8K7I4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA1A8K7I4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
CLCA1A8K7I4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.21■□□□□ 0.67
CLCA1A8K7I4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA1A8K7I4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA1A8K7I4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA1A8K7I4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.21■□□□□ 0.67
CLCA1A8K7I4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA1A8K7I4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.21■□□□□ 0.67
CLCA1A8K7I4 AC137761.2-201ENST00000561729 223 ntBASIC19.21■□□□□ 0.67
CLCA1A8K7I4 AL034346.1-201ENST00000568244 1277 ntBASIC19.21■□□□□ 0.67
CLCA1A8K7I4 AC145350.3-201ENST00000569033 163 ntBASIC19.21■□□□□ 0.67
CLCA1A8K7I4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA1A8K7I4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA1A8K7I4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.21■□□□□ 0.67
CLCA1A8K7I4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA1A8K7I4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CLCA1A8K7I4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CLCA1A8K7I4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA1A8K7I4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA1A8K7I4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
CLCA1A8K7I4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CLCA1A8K7I4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCA1A8K7I4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLCA1A8K7I4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCA1A8K7I4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCA1A8K7I4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLCA1A8K7I4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCA1A8K7I4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCA1A8K7I4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CLCA1A8K7I4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CLCA1A8K7I4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLCA1A8K7I4 KRT19P1-201ENST00000405746 1186 ntBASIC19.2■□□□□ 0.66
CLCA1A8K7I4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.2■□□□□ 0.66
CLCA1A8K7I4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLCA1A8K7I4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.2■□□□□ 0.66
CLCA1A8K7I4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.2■□□□□ 0.66
CLCA1A8K7I4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.2■□□□□ 0.66
CLCA1A8K7I4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.2■□□□□ 0.66
CLCA1A8K7I4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLCA1A8K7I4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCA1A8K7I4 AP005212.1-201ENST00000581547 1997 ntBASIC19.2■□□□□ 0.66
CLCA1A8K7I4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.2■□□□□ 0.66
CLCA1A8K7I4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CLCA1A8K7I4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.19■□□□□ 0.66
CLCA1A8K7I4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCA1A8K7I4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCA1A8K7I4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCA1A8K7I4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLCA1A8K7I4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.19■□□□□ 0.66
CLCA1A8K7I4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CLCA1A8K7I4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLCA1A8K7I4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.19■□□□□ 0.66
CLCA1A8K7I4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.19■□□□□ 0.66
CLCA1A8K7I4 AC016769.1-201ENST00000409132 1010 ntBASIC19.19■□□□□ 0.66
CLCA1A8K7I4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCA1A8K7I4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.19■□□□□ 0.66
CLCA1A8K7I4 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.19■□□□□ 0.66
CLCA1A8K7I4 KRT87P-202ENST00000534226 1464 ntBASIC19.19■□□□□ 0.66
CLCA1A8K7I4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.19■□□□□ 0.66
CLCA1A8K7I4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.19■□□□□ 0.66
CLCA1A8K7I4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.19■□□□□ 0.66
CLCA1A8K7I4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCA1A8K7I4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.19■□□□□ 0.66
CLCA1A8K7I4 AC055733.4-201ENST00000638462 1354 ntBASIC19.19■□□□□ 0.66
CLCA1A8K7I4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLCA1A8K7I4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLCA1A8K7I4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
CLCA1A8K7I4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLCA1A8K7I4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCA1A8K7I4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CLCA1A8K7I4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCA1A8K7I4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCA1A8K7I4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.18■□□□□ 0.66
CLCA1A8K7I4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCA1A8K7I4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.18■□□□□ 0.66
CLCA1A8K7I4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.18■□□□□ 0.66
CLCA1A8K7I4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.18■□□□□ 0.66
CLCA1A8K7I4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.18■□□□□ 0.66
CLCA1A8K7I4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCA1A8K7I4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.18■□□□□ 0.66
CLCA1A8K7I4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLCA1A8K7I4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCA1A8K7I4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCA1A8K7I4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCA1A8K7I4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCA1A8K7I4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLCA1A8K7I4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCA1A8K7I4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CLCA1A8K7I4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.17■□□□□ 0.66
CLCA1A8K7I4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.17■□□□□ 0.66
CLCA1A8K7I4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.17■□□□□ 0.66
CLCA1A8K7I4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLCA1A8K7I4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLCA1A8K7I4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCA1A8K7I4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCA1A8K7I4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLCA1A8K7I4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms