Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SRRM4A7MD48 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SRRM4A7MD48 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SRRM4A7MD48 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM4A7MD48 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.6■□□□□ 0.25
SRRM4A7MD48 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM4A7MD48 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SRRM4A7MD48 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.6■□□□□ 0.25
SRRM4A7MD48 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM4A7MD48 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SRRM4A7MD48 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.6■□□□□ 0.25
SRRM4A7MD48 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.6■□□□□ 0.25
SRRM4A7MD48 AC120498.10-201ENST00000621827 505 ntBASIC16.6■□□□□ 0.25
SRRM4A7MD48 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.6■□□□□ 0.25
SRRM4A7MD48 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM4A7MD48 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM4A7MD48 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM4A7MD48 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
SRRM4A7MD48 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
SRRM4A7MD48 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM4A7MD48 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.6■□□□□ 0.25
SRRM4A7MD48 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM4A7MD48 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.6■□□□□ 0.25
SRRM4A7MD48 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM4A7MD48 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SRRM4A7MD48 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM4A7MD48 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM4A7MD48 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.59■□□□□ 0.25
SRRM4A7MD48 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SRRM4A7MD48 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.59■□□□□ 0.25
SRRM4A7MD48 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM4A7MD48 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.59■□□□□ 0.25
SRRM4A7MD48 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM4A7MD48 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM4A7MD48 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.59■□□□□ 0.25
SRRM4A7MD48 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM4A7MD48 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
SRRM4A7MD48 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM4A7MD48 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM4A7MD48 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM4A7MD48 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.59■□□□□ 0.25
SRRM4A7MD48 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.59■□□□□ 0.25
SRRM4A7MD48 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.59■□□□□ 0.25
SRRM4A7MD48 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.59■□□□□ 0.25
SRRM4A7MD48 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM4A7MD48 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM4A7MD48 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM4A7MD48 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM4A7MD48 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM4A7MD48 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.59■□□□□ 0.25
SRRM4A7MD48 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.59■□□□□ 0.25
SRRM4A7MD48 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SRRM4A7MD48 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
SRRM4A7MD48 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SRRM4A7MD48 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.25
SRRM4A7MD48 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SRRM4A7MD48 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
SRRM4A7MD48 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
SRRM4A7MD48 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SRRM4A7MD48 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SRRM4A7MD48 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.58■□□□□ 0.25
SRRM4A7MD48 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SRRM4A7MD48 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.58■□□□□ 0.24
SRRM4A7MD48 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SRRM4A7MD48 AC245052.3-201ENST00000450182 901 ntBASIC16.58■□□□□ 0.24
SRRM4A7MD48 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
SRRM4A7MD48 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
SRRM4A7MD48 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SRRM4A7MD48 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.58■□□□□ 0.24
SRRM4A7MD48 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
SRRM4A7MD48 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SRRM4A7MD48 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SRRM4A7MD48 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SRRM4A7MD48 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SRRM4A7MD48 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SRRM4A7MD48 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.57■□□□□ 0.24
SRRM4A7MD48 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SRRM4A7MD48 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SRRM4A7MD48 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.57■□□□□ 0.24
SRRM4A7MD48 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.57■□□□□ 0.24
SRRM4A7MD48 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SRRM4A7MD48 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.57■□□□□ 0.24
SRRM4A7MD48 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SRRM4A7MD48 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SRRM4A7MD48 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SRRM4A7MD48 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SRRM4A7MD48 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SRRM4A7MD48 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SRRM4A7MD48 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SRRM4A7MD48 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SRRM4A7MD48 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SRRM4A7MD48 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.57■□□□□ 0.24
SRRM4A7MD48 KRT18P61-201ENST00000585825 1298 ntBASIC16.57■□□□□ 0.24
SRRM4A7MD48 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.57■□□□□ 0.24
SRRM4A7MD48 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SRRM4A7MD48 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SRRM4A7MD48 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SRRM4A7MD48 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SRRM4A7MD48 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SRRM4A7MD48 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms