Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
YJEFN3A6XGL0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
YJEFN3A6XGL0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.56■■□□□ 1.04
YJEFN3A6XGL0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
YJEFN3A6XGL0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.56■■□□□ 1.04
YJEFN3A6XGL0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
YJEFN3A6XGL0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.56■■□□□ 1.04
YJEFN3A6XGL0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
YJEFN3A6XGL0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.56■■□□□ 1.04
YJEFN3A6XGL0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
YJEFN3A6XGL0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
YJEFN3A6XGL0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
YJEFN3A6XGL0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.55■■□□□ 1.04
YJEFN3A6XGL0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
YJEFN3A6XGL0 MKRN4P-201ENST00000444706 1521 ntBASIC21.55■■□□□ 1.04
YJEFN3A6XGL0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
YJEFN3A6XGL0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.55■■□□□ 1.04
YJEFN3A6XGL0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.55■■□□□ 1.04
YJEFN3A6XGL0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.55■■□□□ 1.04
YJEFN3A6XGL0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.55■■□□□ 1.04
YJEFN3A6XGL0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
YJEFN3A6XGL0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.55■■□□□ 1.04
YJEFN3A6XGL0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.55■■□□□ 1.04
YJEFN3A6XGL0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
YJEFN3A6XGL0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
YJEFN3A6XGL0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
YJEFN3A6XGL0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
YJEFN3A6XGL0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
YJEFN3A6XGL0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
YJEFN3A6XGL0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
YJEFN3A6XGL0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.54■■□□□ 1.04
YJEFN3A6XGL0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
YJEFN3A6XGL0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
YJEFN3A6XGL0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
YJEFN3A6XGL0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
YJEFN3A6XGL0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
YJEFN3A6XGL0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.54■■□□□ 1.04
YJEFN3A6XGL0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.54■■□□□ 1.04
YJEFN3A6XGL0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.54■■□□□ 1.04
YJEFN3A6XGL0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
YJEFN3A6XGL0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
YJEFN3A6XGL0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
YJEFN3A6XGL0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.54■■□□□ 1.04
YJEFN3A6XGL0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
YJEFN3A6XGL0 CLDN5-201ENST00000403084 2357 ntBASIC21.53■■□□□ 1.04
YJEFN3A6XGL0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
YJEFN3A6XGL0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
YJEFN3A6XGL0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
YJEFN3A6XGL0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
YJEFN3A6XGL0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
YJEFN3A6XGL0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.53■■□□□ 1.04
YJEFN3A6XGL0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.53■■□□□ 1.04
YJEFN3A6XGL0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.53■■□□□ 1.04
YJEFN3A6XGL0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
YJEFN3A6XGL0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
YJEFN3A6XGL0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
YJEFN3A6XGL0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.53■■□□□ 1.04
YJEFN3A6XGL0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.53■■□□□ 1.04
YJEFN3A6XGL0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.53■■□□□ 1.04
YJEFN3A6XGL0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
YJEFN3A6XGL0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
YJEFN3A6XGL0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
YJEFN3A6XGL0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
YJEFN3A6XGL0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
YJEFN3A6XGL0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
YJEFN3A6XGL0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
YJEFN3A6XGL0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
YJEFN3A6XGL0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
YJEFN3A6XGL0 SLC29A4P1-201ENST00000398760 971 ntBASIC21.52■■□□□ 1.04
YJEFN3A6XGL0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.52■■□□□ 1.04
YJEFN3A6XGL0 AL355472.2-201ENST00000422958 438 ntBASIC21.52■■□□□ 1.04
YJEFN3A6XGL0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.52■■□□□ 1.04
YJEFN3A6XGL0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.52■■□□□ 1.04
YJEFN3A6XGL0 AL138781.1-201ENST00000566567 1274 ntBASIC21.52■■□□□ 1.04
YJEFN3A6XGL0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
YJEFN3A6XGL0 AC100791.3-201ENST00000617619 330 ntBASIC21.52■■□□□ 1.04
YJEFN3A6XGL0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
YJEFN3A6XGL0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.52■■□□□ 1.04
YJEFN3A6XGL0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
YJEFN3A6XGL0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
YJEFN3A6XGL0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.52■■□□□ 1.04
YJEFN3A6XGL0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
YJEFN3A6XGL0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.52■■□□□ 1.03
YJEFN3A6XGL0 CYP21A1P-202ENST00000354927 1481 ntBASIC21.52■■□□□ 1.03
YJEFN3A6XGL0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
YJEFN3A6XGL0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
YJEFN3A6XGL0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
YJEFN3A6XGL0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
YJEFN3A6XGL0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
YJEFN3A6XGL0 MIPEPP3-201ENST00000412105 444 ntBASIC21.51■■□□□ 1.03
YJEFN3A6XGL0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.51■■□□□ 1.03
YJEFN3A6XGL0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
YJEFN3A6XGL0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
YJEFN3A6XGL0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
YJEFN3A6XGL0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.51■■□□□ 1.03
YJEFN3A6XGL0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.51■■□□□ 1.03
YJEFN3A6XGL0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.51■■□□□ 1.03
YJEFN3A6XGL0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.5■■□□□ 1.03
YJEFN3A6XGL0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
YJEFN3A6XGL0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms