Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CGB1A6NKQ9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CGB1A6NKQ9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CGB1A6NKQ9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CGB1A6NKQ9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CGB1A6NKQ9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CGB1A6NKQ9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.46■□□□□ 0.23
CGB1A6NKQ9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CGB1A6NKQ9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CGB1A6NKQ9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CGB1A6NKQ9 GABARAPL3-202ENST00000624044 1851 ntBASIC16.46■□□□□ 0.23
CGB1A6NKQ9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CGB1A6NKQ9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CGB1A6NKQ9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.46■□□□□ 0.23
CGB1A6NKQ9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CGB1A6NKQ9 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.46■□□□□ 0.23
CGB1A6NKQ9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.46■□□□□ 0.23
CGB1A6NKQ9 POU5F1P4-201ENST00000413175 1085 ntBASIC16.46■□□□□ 0.23
CGB1A6NKQ9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.46■□□□□ 0.23
CGB1A6NKQ9 RARRES2P11-201ENST00000635158 484 ntBASIC16.46■□□□□ 0.23
CGB1A6NKQ9 AC007225.1-201ENST00000566331 1836 ntBASIC16.46■□□□□ 0.23
CGB1A6NKQ9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CGB1A6NKQ9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CGB1A6NKQ9 LINC02228-203ENST00000641970 1355 ntBASIC16.46■□□□□ 0.23
CGB1A6NKQ9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CGB1A6NKQ9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CGB1A6NKQ9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CGB1A6NKQ9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CGB1A6NKQ9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CGB1A6NKQ9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.45■□□□□ 0.22
CGB1A6NKQ9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CGB1A6NKQ9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CGB1A6NKQ9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CGB1A6NKQ9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.45■□□□□ 0.22
CGB1A6NKQ9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CGB1A6NKQ9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.45■□□□□ 0.22
CGB1A6NKQ9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CGB1A6NKQ9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CGB1A6NKQ9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.45■□□□□ 0.22
CGB1A6NKQ9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.45■□□□□ 0.22
CGB1A6NKQ9 TERF1P2-201ENST00000583350 1212 ntBASIC16.45■□□□□ 0.22
CGB1A6NKQ9 AC008175.2-201ENST00000612840 297 ntBASIC16.45■□□□□ 0.22
CGB1A6NKQ9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CGB1A6NKQ9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CGB1A6NKQ9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CGB1A6NKQ9 AC027702.1-201ENST00000563810 1770 ntBASIC16.45■□□□□ 0.22
CGB1A6NKQ9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CGB1A6NKQ9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CGB1A6NKQ9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CGB1A6NKQ9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CGB1A6NKQ9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CGB1A6NKQ9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.45■□□□□ 0.22
CGB1A6NKQ9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CGB1A6NKQ9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 AC011484.1-201ENST00000377652 1995 ntBASIC16.44■□□□□ 0.22
CGB1A6NKQ9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 AC010141.2-201ENST00000452426 721 ntBASIC16.44■□□□□ 0.22
CGB1A6NKQ9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CGB1A6NKQ9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CGB1A6NKQ9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CGB1A6NKQ9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CGB1A6NKQ9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CGB1A6NKQ9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
CGB1A6NKQ9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CGB1A6NKQ9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CGB1A6NKQ9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CGB1A6NKQ9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CGB1A6NKQ9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CGB1A6NKQ9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CGB1A6NKQ9 AC123595.1-201ENST00000440769 1046 ntBASIC16.43■□□□□ 0.22
CGB1A6NKQ9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.43■□□□□ 0.22
CGB1A6NKQ9 AC104187.1-201ENST00000607510 612 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms