Protein–RNA interactions for Protein: A6NKL6

TMEM200C, Transmembrane protein 200C, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200CA6NKL6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM200CA6NKL6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TMEM200CA6NKL6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TMEM200CA6NKL6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM200CA6NKL6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM200CA6NKL6 MKRN4P-201ENST00000444706 1521 ntBASIC19.11■□□□□ 0.65
TMEM200CA6NKL6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TMEM200CA6NKL6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.11■□□□□ 0.65
TMEM200CA6NKL6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.11■□□□□ 0.65
TMEM200CA6NKL6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.11■□□□□ 0.65
TMEM200CA6NKL6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.11■□□□□ 0.65
TMEM200CA6NKL6 CDV3P1-201ENST00000471403 739 ntBASIC19.11■□□□□ 0.65
TMEM200CA6NKL6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.11■□□□□ 0.65
TMEM200CA6NKL6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
TMEM200CA6NKL6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
TMEM200CA6NKL6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM200CA6NKL6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM200CA6NKL6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM200CA6NKL6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM200CA6NKL6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM200CA6NKL6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.1■□□□□ 0.65
TMEM200CA6NKL6 SLC29A4P1-201ENST00000398760 971 ntBASIC19.1■□□□□ 0.65
TMEM200CA6NKL6 MIPEPP3-201ENST00000412105 444 ntBASIC19.1■□□□□ 0.65
TMEM200CA6NKL6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TMEM200CA6NKL6 AC007322.3-201ENST00000426526 701 ntBASIC19.1■□□□□ 0.65
TMEM200CA6NKL6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM200CA6NKL6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.1■□□□□ 0.65
TMEM200CA6NKL6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.1■□□□□ 0.65
TMEM200CA6NKL6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.1■□□□□ 0.65
TMEM200CA6NKL6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM200CA6NKL6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM200CA6NKL6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM200CA6NKL6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM200CA6NKL6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM200CA6NKL6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM200CA6NKL6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM200CA6NKL6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM200CA6NKL6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM200CA6NKL6 AC116050.2-201ENST00000612102 1779 ntBASIC19.09■□□□□ 0.65
TMEM200CA6NKL6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.09■□□□□ 0.65
TMEM200CA6NKL6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.09■□□□□ 0.65
TMEM200CA6NKL6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM200CA6NKL6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM200CA6NKL6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.09■□□□□ 0.65
TMEM200CA6NKL6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.09■□□□□ 0.65
TMEM200CA6NKL6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.09■□□□□ 0.65
TMEM200CA6NKL6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.09■□□□□ 0.65
TMEM200CA6NKL6 AC098934.4-201ENST00000564127 592 ntBASIC19.09■□□□□ 0.65
TMEM200CA6NKL6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.09■□□□□ 0.65
TMEM200CA6NKL6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.09■□□□□ 0.65
TMEM200CA6NKL6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.09■□□□□ 0.65
TMEM200CA6NKL6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TMEM200CA6NKL6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM200CA6NKL6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM200CA6NKL6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM200CA6NKL6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.09■□□□□ 0.65
TMEM200CA6NKL6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TMEM200CA6NKL6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.08■□□□□ 0.65
TMEM200CA6NKL6 SLC25A24-204ENST00000569674 2357 ntBASIC19.08■□□□□ 0.65
TMEM200CA6NKL6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TMEM200CA6NKL6 AC007375.3-201ENST00000600936 2314 ntBASIC19.08■□□□□ 0.65
TMEM200CA6NKL6 FEM1AP4-201ENST00000443167 1987 ntBASIC19.08■□□□□ 0.65
TMEM200CA6NKL6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TMEM200CA6NKL6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TMEM200CA6NKL6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
TMEM200CA6NKL6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
TMEM200CA6NKL6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.08■□□□□ 0.64
TMEM200CA6NKL6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.08■□□□□ 0.64
TMEM200CA6NKL6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.08■□□□□ 0.64
TMEM200CA6NKL6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.08■□□□□ 0.64
TMEM200CA6NKL6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.08■□□□□ 0.64
TMEM200CA6NKL6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.08■□□□□ 0.64
TMEM200CA6NKL6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM200CA6NKL6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TMEM200CA6NKL6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM200CA6NKL6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM200CA6NKL6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM200CA6NKL6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TMEM200CA6NKL6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
TMEM200CA6NKL6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TMEM200CA6NKL6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM200CA6NKL6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM200CA6NKL6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TMEM200CA6NKL6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM200CA6NKL6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
TMEM200CA6NKL6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM200CA6NKL6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TMEM200CA6NKL6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TMEM200CA6NKL6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.07■□□□□ 0.64
TMEM200CA6NKL6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.07■□□□□ 0.64
TMEM200CA6NKL6 AC100791.3-201ENST00000617619 330 ntBASIC19.07■□□□□ 0.64
TMEM200CA6NKL6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM200CA6NKL6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM200CA6NKL6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TMEM200CA6NKL6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TMEM200CA6NKL6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM200CA6NKL6 AC026310.3-201ENST00000625186 2373 ntBASIC19.06■□□□□ 0.64
TMEM200CA6NKL6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM200CA6NKL6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.06■□□□□ 0.64
TMEM200CA6NKL6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms