Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.64■□□□□ 0.41
MEIS3P1A6NDR6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MEIS3P1A6NDR6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
MEIS3P1A6NDR6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.64■□□□□ 0.41
MEIS3P1A6NDR6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
MEIS3P1A6NDR6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
MEIS3P1A6NDR6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MEIS3P1A6NDR6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MEIS3P1A6NDR6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.64■□□□□ 0.41
MEIS3P1A6NDR6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
MEIS3P1A6NDR6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MEIS3P1A6NDR6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MEIS3P1A6NDR6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MEIS3P1A6NDR6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MEIS3P1A6NDR6 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MEIS3P1A6NDR6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MEIS3P1A6NDR6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MEIS3P1A6NDR6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.63■□□□□ 0.41
MEIS3P1A6NDR6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MEIS3P1A6NDR6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
MEIS3P1A6NDR6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.63■□□□□ 0.41
MEIS3P1A6NDR6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MEIS3P1A6NDR6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.63■□□□□ 0.41
MEIS3P1A6NDR6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.63■□□□□ 0.41
MEIS3P1A6NDR6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
MEIS3P1A6NDR6 AL162377.1-201ENST00000618844 1793 ntBASIC17.63■□□□□ 0.41
MEIS3P1A6NDR6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MEIS3P1A6NDR6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MEIS3P1A6NDR6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
MEIS3P1A6NDR6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MEIS3P1A6NDR6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MEIS3P1A6NDR6 AIRN-201ENST00000601203 4374 ntBASIC17.63■□□□□ 0.41
MEIS3P1A6NDR6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
MEIS3P1A6NDR6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MEIS3P1A6NDR6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MEIS3P1A6NDR6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.62■□□□□ 0.41
MEIS3P1A6NDR6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MEIS3P1A6NDR6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
MEIS3P1A6NDR6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.62■□□□□ 0.41
MEIS3P1A6NDR6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MEIS3P1A6NDR6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.62■□□□□ 0.41
MEIS3P1A6NDR6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.62■□□□□ 0.41
MEIS3P1A6NDR6 AC009299.2-201ENST00000482477 511 ntBASIC17.62■□□□□ 0.41
MEIS3P1A6NDR6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.62■□□□□ 0.41
MEIS3P1A6NDR6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
MEIS3P1A6NDR6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MEIS3P1A6NDR6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MEIS3P1A6NDR6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MEIS3P1A6NDR6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MEIS3P1A6NDR6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MEIS3P1A6NDR6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MEIS3P1A6NDR6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MEIS3P1A6NDR6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
MEIS3P1A6NDR6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MEIS3P1A6NDR6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MEIS3P1A6NDR6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MEIS3P1A6NDR6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MEIS3P1A6NDR6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MEIS3P1A6NDR6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.61■□□□□ 0.41
MEIS3P1A6NDR6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MEIS3P1A6NDR6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
MEIS3P1A6NDR6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MEIS3P1A6NDR6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MEIS3P1A6NDR6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MEIS3P1A6NDR6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.61■□□□□ 0.41
MEIS3P1A6NDR6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
MEIS3P1A6NDR6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
MEIS3P1A6NDR6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MEIS3P1A6NDR6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MEIS3P1A6NDR6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MEIS3P1A6NDR6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MEIS3P1A6NDR6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MEIS3P1A6NDR6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
MEIS3P1A6NDR6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MEIS3P1A6NDR6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.6■□□□□ 0.41
MEIS3P1A6NDR6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MEIS3P1A6NDR6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MEIS3P1A6NDR6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MEIS3P1A6NDR6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MEIS3P1A6NDR6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MEIS3P1A6NDR6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
MEIS3P1A6NDR6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
MEIS3P1A6NDR6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
MEIS3P1A6NDR6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MEIS3P1A6NDR6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MEIS3P1A6NDR6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
MEIS3P1A6NDR6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MEIS3P1A6NDR6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.6■□□□□ 0.41
MEIS3P1A6NDR6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MEIS3P1A6NDR6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
MEIS3P1A6NDR6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
MEIS3P1A6NDR6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MEIS3P1A6NDR6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.59■□□□□ 0.41
MEIS3P1A6NDR6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MEIS3P1A6NDR6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MEIS3P1A6NDR6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.59■□□□□ 0.41
MEIS3P1A6NDR6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
MEIS3P1A6NDR6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.59■□□□□ 0.41
MEIS3P1A6NDR6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
MEIS3P1A6NDR6 KRT16P3-201ENST00000439127 1283 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms