Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRIT2A6NDA9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRIT2A6NDA9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 AC092666.2-201ENST00000613287 246 ntBASIC19.62■□□□□ 0.73
LRIT2A6NDA9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT2A6NDA9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.61■□□□□ 0.73
LRIT2A6NDA9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRIT2A6NDA9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRIT2A6NDA9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.61■□□□□ 0.73
LRIT2A6NDA9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LRIT2A6NDA9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRIT2A6NDA9 AC068338.2-201ENST00000563278 1430 ntBASIC19.61■□□□□ 0.73
LRIT2A6NDA9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRIT2A6NDA9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRIT2A6NDA9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRIT2A6NDA9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.61■□□□□ 0.73
LRIT2A6NDA9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.61■□□□□ 0.73
LRIT2A6NDA9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRIT2A6NDA9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LRIT2A6NDA9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
LRIT2A6NDA9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.61■□□□□ 0.73
LRIT2A6NDA9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.61■□□□□ 0.73
LRIT2A6NDA9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.61■□□□□ 0.73
LRIT2A6NDA9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.61■□□□□ 0.73
LRIT2A6NDA9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.61■□□□□ 0.73
LRIT2A6NDA9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRIT2A6NDA9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRIT2A6NDA9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.61■□□□□ 0.73
LRIT2A6NDA9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRIT2A6NDA9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRIT2A6NDA9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRIT2A6NDA9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRIT2A6NDA9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.6■□□□□ 0.73
LRIT2A6NDA9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRIT2A6NDA9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.6■□□□□ 0.73
LRIT2A6NDA9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.6■□□□□ 0.73
LRIT2A6NDA9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRIT2A6NDA9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRIT2A6NDA9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRIT2A6NDA9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRIT2A6NDA9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRIT2A6NDA9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRIT2A6NDA9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRIT2A6NDA9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRIT2A6NDA9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRIT2A6NDA9 AC007322.1-201ENST00000426983 750 ntBASIC19.6■□□□□ 0.73
LRIT2A6NDA9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.6■□□□□ 0.73
LRIT2A6NDA9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.6■□□□□ 0.73
LRIT2A6NDA9 AC073111.5-205ENST00000641717 521 ntBASIC19.6■□□□□ 0.73
LRIT2A6NDA9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
LRIT2A6NDA9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRIT2A6NDA9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.6■□□□□ 0.73
LRIT2A6NDA9 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRIT2A6NDA9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.6■□□□□ 0.73
LRIT2A6NDA9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.6■□□□□ 0.73
LRIT2A6NDA9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.6■□□□□ 0.73
LRIT2A6NDA9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRIT2A6NDA9 AC027702.1-201ENST00000563810 1770 ntBASIC19.6■□□□□ 0.73
LRIT2A6NDA9 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.59■□□□□ 0.73
LRIT2A6NDA9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRIT2A6NDA9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRIT2A6NDA9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRIT2A6NDA9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRIT2A6NDA9 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.59■□□□□ 0.73
LRIT2A6NDA9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRIT2A6NDA9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRIT2A6NDA9 CDCA4P2-201ENST00000441182 718 ntBASIC19.59■□□□□ 0.73
LRIT2A6NDA9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.59■□□□□ 0.73
LRIT2A6NDA9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.59■□□□□ 0.73
LRIT2A6NDA9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRIT2A6NDA9 FAM21FP-204ENST00000608637 956 ntBASIC19.59■□□□□ 0.73
LRIT2A6NDA9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.59■□□□□ 0.73
LRIT2A6NDA9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.59■□□□□ 0.73
LRIT2A6NDA9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
LRIT2A6NDA9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms