Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 AC137761.2-201ENST00000561729 223 ntBASIC20.62■□□□□ 0.89
CCDC162PA2VCL2 AC145350.3-201ENST00000569033 163 ntBASIC20.62■□□□□ 0.89
CCDC162PA2VCL2 AC243732.1-201ENST00000612648 864 ntBASIC20.62■□□□□ 0.89
CCDC162PA2VCL2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC162PA2VCL2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
CCDC162PA2VCL2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC162PA2VCL2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC162PA2VCL2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC162PA2VCL2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC162PA2VCL2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC162PA2VCL2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC162PA2VCL2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC162PA2VCL2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC162PA2VCL2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC162PA2VCL2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC162PA2VCL2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC162PA2VCL2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC162PA2VCL2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CCDC162PA2VCL2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC162PA2VCL2 AL157384.1-201ENST00000445995 2473 ntBASIC20.61■□□□□ 0.89
CCDC162PA2VCL2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC162PA2VCL2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC162PA2VCL2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC162PA2VCL2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC162PA2VCL2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC162PA2VCL2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC162PA2VCL2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC162PA2VCL2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
CCDC162PA2VCL2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CCDC162PA2VCL2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CCDC162PA2VCL2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC162PA2VCL2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC162PA2VCL2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC162PA2VCL2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC162PA2VCL2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC162PA2VCL2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC162PA2VCL2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC162PA2VCL2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC162PA2VCL2 AC091799.1-201ENST00000422823 811 ntBASIC20.6■□□□□ 0.89
CCDC162PA2VCL2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC162PA2VCL2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC162PA2VCL2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC162PA2VCL2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CCDC162PA2VCL2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CCDC162PA2VCL2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC162PA2VCL2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC162PA2VCL2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC162PA2VCL2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CCDC162PA2VCL2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC162PA2VCL2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC162PA2VCL2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CCDC162PA2VCL2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC162PA2VCL2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC162PA2VCL2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC162PA2VCL2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC162PA2VCL2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC162PA2VCL2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC162PA2VCL2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC162PA2VCL2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC162PA2VCL2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CCDC162PA2VCL2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC162PA2VCL2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC162PA2VCL2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC162PA2VCL2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC162PA2VCL2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC162PA2VCL2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC162PA2VCL2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC162PA2VCL2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC162PA2VCL2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC162PA2VCL2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC162PA2VCL2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC162PA2VCL2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC162PA2VCL2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC162PA2VCL2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC162PA2VCL2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC162PA2VCL2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC162PA2VCL2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CCDC162PA2VCL2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CCDC162PA2VCL2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC162PA2VCL2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC162PA2VCL2 MIR935-201ENST00000401179 91 ntBASIC20.58■□□□□ 0.89
CCDC162PA2VCL2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC162PA2VCL2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC162PA2VCL2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC162PA2VCL2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC162PA2VCL2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC162PA2VCL2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC162PA2VCL2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.58■□□□□ 0.88
CCDC162PA2VCL2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC162PA2VCL2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCDC162PA2VCL2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC162PA2VCL2 AC007225.1-201ENST00000566331 1836 ntBASIC20.57■□□□□ 0.88
CCDC162PA2VCL2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC162PA2VCL2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC162PA2VCL2 AC116050.2-201ENST00000612102 1779 ntBASIC20.57■□□□□ 0.88
CCDC162PA2VCL2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC162PA2VCL2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CCDC162PA2VCL2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC162PA2VCL2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC162PA2VCL2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms