Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 AC099778.1-201ENST00000568593 1911 ntBASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.77■□□□□ 0.92
TCRBV9S1A1TA0A576 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV9S1A1TA0A576 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV9S1A1TA0A576 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
TCRBV9S1A1TA0A576 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.77■□□□□ 0.92
TCRBV9S1A1TA0A576 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV9S1A1TA0A576 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV9S1A1TA0A576 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV9S1A1TA0A576 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV9S1A1TA0A576 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV9S1A1TA0A576 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.77■□□□□ 0.92
TCRBV9S1A1TA0A576 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.77■□□□□ 0.92
TCRBV9S1A1TA0A576 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV9S1A1TA0A576 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.77■□□□□ 0.92
TCRBV9S1A1TA0A576 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TCRBV9S1A1TA0A576 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.77■□□□□ 0.91
TCRBV9S1A1TA0A576 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TCRBV9S1A1TA0A576 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TCRBV9S1A1TA0A576 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TCRBV9S1A1TA0A576 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TCRBV9S1A1TA0A576 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.76■□□□□ 0.91
TCRBV9S1A1TA0A576 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TCRBV9S1A1TA0A576 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TCRBV9S1A1TA0A576 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
TCRBV9S1A1TA0A576 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.76■□□□□ 0.91
TCRBV9S1A1TA0A576 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.76■□□□□ 0.91
TCRBV9S1A1TA0A576 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TCRBV9S1A1TA0A576 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TCRBV9S1A1TA0A576 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TCRBV9S1A1TA0A576 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TCRBV9S1A1TA0A576 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TCRBV9S1A1TA0A576 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TCRBV9S1A1TA0A576 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TCRBV9S1A1TA0A576 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TCRBV9S1A1TA0A576 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TCRBV9S1A1TA0A576 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.75■□□□□ 0.91
TCRBV9S1A1TA0A576 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TCRBV9S1A1TA0A576 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TCRBV9S1A1TA0A576 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TCRBV9S1A1TA0A576 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.75■□□□□ 0.91
TCRBV9S1A1TA0A576 AL354811.1-201ENST00000610286 706 ntBASIC20.75■□□□□ 0.91
TCRBV9S1A1TA0A576 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
TCRBV9S1A1TA0A576 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
TCRBV9S1A1TA0A576 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TCRBV9S1A1TA0A576 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TCRBV9S1A1TA0A576 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.75■□□□□ 0.91
TCRBV9S1A1TA0A576 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TCRBV9S1A1TA0A576 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.74■□□□□ 0.91
TCRBV9S1A1TA0A576 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBV9S1A1TA0A576 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBV9S1A1TA0A576 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.74■□□□□ 0.91
TCRBV9S1A1TA0A576 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBV9S1A1TA0A576 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.74■□□□□ 0.91
TCRBV9S1A1TA0A576 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.74■□□□□ 0.91
TCRBV9S1A1TA0A576 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBV9S1A1TA0A576 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBV9S1A1TA0A576 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TCRBV9S1A1TA0A576 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
TCRBV9S1A1TA0A576 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.74■□□□□ 0.91
TCRBV9S1A1TA0A576 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBV9S1A1TA0A576 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBV9S1A1TA0A576 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBV9S1A1TA0A576 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.74■□□□□ 0.91
TCRBV9S1A1TA0A576 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBV9S1A1TA0A576 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBV9S1A1TA0A576 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBV9S1A1TA0A576 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.74■□□□□ 0.91
TCRBV9S1A1TA0A576 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBV9S1A1TA0A576 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.73■□□□□ 0.91
TCRBV9S1A1TA0A576 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TCRBV9S1A1TA0A576 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TCRBV9S1A1TA0A576 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TCRBV9S1A1TA0A576 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.73■□□□□ 0.91
TCRBV9S1A1TA0A576 POU5F1P4-201ENST00000413175 1085 ntBASIC20.73■□□□□ 0.91
TCRBV9S1A1TA0A576 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.73■□□□□ 0.91
TCRBV9S1A1TA0A576 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.73■□□□□ 0.91
TCRBV9S1A1TA0A576 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.73■□□□□ 0.91
TCRBV9S1A1TA0A576 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TCRBV9S1A1TA0A576 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.73■□□□□ 0.91
TCRBV9S1A1TA0A576 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TCRBV9S1A1TA0A576 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TCRBV9S1A1TA0A576 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBV9S1A1TA0A576 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.72■□□□□ 0.91
TCRBV9S1A1TA0A576 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms