Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
CCDC196A0A1B0GTZ2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CCDC196A0A1B0GTZ2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CCDC196A0A1B0GTZ2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC24■■□□□ 1.43
CCDC196A0A1B0GTZ2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC24■■□□□ 1.43
CCDC196A0A1B0GTZ2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCDC196A0A1B0GTZ2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCDC196A0A1B0GTZ2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCDC196A0A1B0GTZ2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC196A0A1B0GTZ2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
CCDC196A0A1B0GTZ2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC196A0A1B0GTZ2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC196A0A1B0GTZ2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC196A0A1B0GTZ2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC196A0A1B0GTZ2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
CCDC196A0A1B0GTZ2 CNN2P6-201ENST00000439038 900 ntBASIC23.99■■□□□ 1.43
CCDC196A0A1B0GTZ2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC196A0A1B0GTZ2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.99■■□□□ 1.43
CCDC196A0A1B0GTZ2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.99■■□□□ 1.43
CCDC196A0A1B0GTZ2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.99■■□□□ 1.43
CCDC196A0A1B0GTZ2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC196A0A1B0GTZ2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC196A0A1B0GTZ2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.99■■□□□ 1.43
CCDC196A0A1B0GTZ2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC196A0A1B0GTZ2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC196A0A1B0GTZ2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
CCDC196A0A1B0GTZ2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC196A0A1B0GTZ2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC196A0A1B0GTZ2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC196A0A1B0GTZ2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC196A0A1B0GTZ2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC196A0A1B0GTZ2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC196A0A1B0GTZ2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.98■■□□□ 1.43
CCDC196A0A1B0GTZ2 FAM21FP-204ENST00000608637 956 ntBASIC23.98■■□□□ 1.43
CCDC196A0A1B0GTZ2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.98■■□□□ 1.43
CCDC196A0A1B0GTZ2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
CCDC196A0A1B0GTZ2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC196A0A1B0GTZ2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
CCDC196A0A1B0GTZ2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.98■■□□□ 1.43
CCDC196A0A1B0GTZ2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC196A0A1B0GTZ2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC196A0A1B0GTZ2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC196A0A1B0GTZ2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC196A0A1B0GTZ2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC196A0A1B0GTZ2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC23.97■■□□□ 1.43
CCDC196A0A1B0GTZ2 AC004911.1-201ENST00000416316 871 ntBASIC23.97■■□□□ 1.43
CCDC196A0A1B0GTZ2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC196A0A1B0GTZ2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
CCDC196A0A1B0GTZ2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.97■■□□□ 1.43
CCDC196A0A1B0GTZ2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.97■■□□□ 1.43
CCDC196A0A1B0GTZ2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.97■■□□□ 1.43
CCDC196A0A1B0GTZ2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
CCDC196A0A1B0GTZ2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC196A0A1B0GTZ2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC23.97■■□□□ 1.43
CCDC196A0A1B0GTZ2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
CCDC196A0A1B0GTZ2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC196A0A1B0GTZ2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.96■■□□□ 1.43
CCDC196A0A1B0GTZ2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC196A0A1B0GTZ2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.96■■□□□ 1.43
CCDC196A0A1B0GTZ2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.96■■□□□ 1.43
CCDC196A0A1B0GTZ2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
CCDC196A0A1B0GTZ2 AC007322.1-201ENST00000426983 750 ntBASIC23.96■■□□□ 1.43
CCDC196A0A1B0GTZ2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.96■■□□□ 1.43
CCDC196A0A1B0GTZ2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.96■■□□□ 1.43
CCDC196A0A1B0GTZ2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
CCDC196A0A1B0GTZ2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.96■■□□□ 1.43
CCDC196A0A1B0GTZ2 AC080038.1-201ENST00000611274 1154 ntBASIC23.96■■□□□ 1.43
CCDC196A0A1B0GTZ2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC196A0A1B0GTZ2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC196A0A1B0GTZ2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC196A0A1B0GTZ2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC196A0A1B0GTZ2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC196A0A1B0GTZ2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC196A0A1B0GTZ2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.96■■□□□ 1.43
CCDC196A0A1B0GTZ2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC196A0A1B0GTZ2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC196A0A1B0GTZ2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
CCDC196A0A1B0GTZ2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.95■■□□□ 1.42
CCDC196A0A1B0GTZ2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC196A0A1B0GTZ2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC196A0A1B0GTZ2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC196A0A1B0GTZ2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
CCDC196A0A1B0GTZ2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC196A0A1B0GTZ2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.95■■□□□ 1.42
CCDC196A0A1B0GTZ2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.95■■□□□ 1.42
CCDC196A0A1B0GTZ2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC196A0A1B0GTZ2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC196A0A1B0GTZ2 AC027702.1-201ENST00000563810 1770 ntBASIC23.95■■□□□ 1.42
CCDC196A0A1B0GTZ2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC196A0A1B0GTZ2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC196A0A1B0GTZ2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC196A0A1B0GTZ2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC196A0A1B0GTZ2 AC068338.2-201ENST00000563278 1430 ntBASIC23.94■■□□□ 1.42
CCDC196A0A1B0GTZ2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC196A0A1B0GTZ2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC196A0A1B0GTZ2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.94■■□□□ 1.42
CCDC196A0A1B0GTZ2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC196A0A1B0GTZ2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.94■■□□□ 1.42
CCDC196A0A1B0GTZ2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
CCDC196A0A1B0GTZ2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms