Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AC099778.1-201ENST00000568593 1911 ntBASIC18.92■□□□□ 0.62
TRBV4-1A0A0J9YWV2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV4-1A0A0J9YWV2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.92■□□□□ 0.62
TRBV4-1A0A0J9YWV2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV4-1A0A0J9YWV2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV4-1A0A0J9YWV2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV4-1A0A0J9YWV2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV4-1A0A0J9YWV2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV4-1A0A0J9YWV2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV4-1A0A0J9YWV2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.91■□□□□ 0.62
TRBV4-1A0A0J9YWV2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.91■□□□□ 0.62
TRBV4-1A0A0J9YWV2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV4-1A0A0J9YWV2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV4-1A0A0J9YWV2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV4-1A0A0J9YWV2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.91■□□□□ 0.62
TRBV4-1A0A0J9YWV2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV4-1A0A0J9YWV2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV4-1A0A0J9YWV2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.91■□□□□ 0.62
TRBV4-1A0A0J9YWV2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.91■□□□□ 0.62
TRBV4-1A0A0J9YWV2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.91■□□□□ 0.62
TRBV4-1A0A0J9YWV2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV4-1A0A0J9YWV2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV4-1A0A0J9YWV2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
TRBV4-1A0A0J9YWV2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV4-1A0A0J9YWV2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV4-1A0A0J9YWV2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV4-1A0A0J9YWV2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRBV4-1A0A0J9YWV2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.9■□□□□ 0.62
TRBV4-1A0A0J9YWV2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.9■□□□□ 0.62
TRBV4-1A0A0J9YWV2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV4-1A0A0J9YWV2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.9■□□□□ 0.62
TRBV4-1A0A0J9YWV2 AC131212.1-201ENST00000613771 668 ntBASIC18.9■□□□□ 0.62
TRBV4-1A0A0J9YWV2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.9■□□□□ 0.62
TRBV4-1A0A0J9YWV2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRBV4-1A0A0J9YWV2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TRBV4-1A0A0J9YWV2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV4-1A0A0J9YWV2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
TRBV4-1A0A0J9YWV2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV4-1A0A0J9YWV2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV4-1A0A0J9YWV2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.89■□□□□ 0.62
TRBV4-1A0A0J9YWV2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRBV4-1A0A0J9YWV2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRBV4-1A0A0J9YWV2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV4-1A0A0J9YWV2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.89■□□□□ 0.61
TRBV4-1A0A0J9YWV2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TRBV4-1A0A0J9YWV2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV4-1A0A0J9YWV2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.89■□□□□ 0.61
TRBV4-1A0A0J9YWV2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV4-1A0A0J9YWV2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV4-1A0A0J9YWV2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.89■□□□□ 0.61
TRBV4-1A0A0J9YWV2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.89■□□□□ 0.61
TRBV4-1A0A0J9YWV2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV4-1A0A0J9YWV2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV4-1A0A0J9YWV2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV4-1A0A0J9YWV2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.89■□□□□ 0.61
TRBV4-1A0A0J9YWV2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV4-1A0A0J9YWV2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV4-1A0A0J9YWV2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV4-1A0A0J9YWV2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TRBV4-1A0A0J9YWV2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV4-1A0A0J9YWV2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TRBV4-1A0A0J9YWV2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRBV4-1A0A0J9YWV2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV4-1A0A0J9YWV2 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.88■□□□□ 0.61
TRBV4-1A0A0J9YWV2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV4-1A0A0J9YWV2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV4-1A0A0J9YWV2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.88■□□□□ 0.61
TRBV4-1A0A0J9YWV2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.88■□□□□ 0.61
TRBV4-1A0A0J9YWV2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.88■□□□□ 0.61
TRBV4-1A0A0J9YWV2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.88■□□□□ 0.61
TRBV4-1A0A0J9YWV2 AC106739.1-201ENST00000617035 715 ntBASIC18.88■□□□□ 0.61
TRBV4-1A0A0J9YWV2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV4-1A0A0J9YWV2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.88■□□□□ 0.61
TRBV4-1A0A0J9YWV2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV4-1A0A0J9YWV2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV4-1A0A0J9YWV2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV4-1A0A0J9YWV2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV4-1A0A0J9YWV2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.88■□□□□ 0.61
TRBV4-1A0A0J9YWV2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV4-1A0A0J9YWV2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV4-1A0A0J9YWV2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV4-1A0A0J9YWV2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV4-1A0A0J9YWV2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV4-1A0A0J9YWV2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV4-1A0A0J9YWV2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV4-1A0A0J9YWV2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV4-1A0A0J9YWV2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRBV4-1A0A0J9YWV2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV4-1A0A0J9YWV2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV4-1A0A0J9YWV2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV4-1A0A0J9YWV2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV4-1A0A0J9YWV2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV4-1A0A0J9YWV2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV4-1A0A0J9YWV2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.87■□□□□ 0.61
TRBV4-1A0A0J9YWV2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV4-1A0A0J9YWV2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
TRBV4-1A0A0J9YWV2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV4-1A0A0J9YWV2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.87■□□□□ 0.61
TRBV4-1A0A0J9YWV2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV4-1A0A0J9YWV2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms