Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV21A0A0B4J279 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV21A0A0B4J279 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV21A0A0B4J279 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRAV21A0A0B4J279 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV21A0A0B4J279 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRAV21A0A0B4J279 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV21A0A0B4J279 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV21A0A0B4J279 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRAV21A0A0B4J279 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV21A0A0B4J279 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV21A0A0B4J279 AC099791.1-201ENST00000416440 715 ntBASIC15.32■□□□□ 0.04
TRAV21A0A0B4J279 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRAV21A0A0B4J279 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.32■□□□□ 0.04
TRAV21A0A0B4J279 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRAV21A0A0B4J279 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV21A0A0B4J279 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV21A0A0B4J279 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV21A0A0B4J279 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV21A0A0B4J279 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRAV21A0A0B4J279 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV21A0A0B4J279 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV21A0A0B4J279 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRAV21A0A0B4J279 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV21A0A0B4J279 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV21A0A0B4J279 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV21A0A0B4J279 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV21A0A0B4J279 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV21A0A0B4J279 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 AP004607.4-201ENST00000530158 1459 ntBASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 AC020907.5-201ENST00000624372 1936 ntBASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV21A0A0B4J279 HCG11-201ENST00000411553 5696 ntBASIC15.3■□□□□ 0.04
TRAV21A0A0B4J279 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV21A0A0B4J279 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV21A0A0B4J279 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV21A0A0B4J279 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV21A0A0B4J279 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV21A0A0B4J279 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV21A0A0B4J279 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV21A0A0B4J279 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV21A0A0B4J279 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV21A0A0B4J279 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRAV21A0A0B4J279 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC15.3■□□□□ 0.04
TRAV21A0A0B4J279 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV21A0A0B4J279 AC027702.1-201ENST00000563810 1770 ntBASIC15.3■□□□□ 0.04
TRAV21A0A0B4J279 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV21A0A0B4J279 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV21A0A0B4J279 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV21A0A0B4J279 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC15.3■□□□□ 0.04
TRAV21A0A0B4J279 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV21A0A0B4J279 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRAV21A0A0B4J279 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV21A0A0B4J279 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV21A0A0B4J279 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV21A0A0B4J279 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV21A0A0B4J279 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRAV21A0A0B4J279 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRAV21A0A0B4J279 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC15.29■□□□□ 0.04
TRAV21A0A0B4J279 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV21A0A0B4J279 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV21A0A0B4J279 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRAV21A0A0B4J279 AC053503.5-201ENST00000601508 636 ntBASIC15.29■□□□□ 0.04
TRAV21A0A0B4J279 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV21A0A0B4J279 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV21A0A0B4J279 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV21A0A0B4J279 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV21A0A0B4J279 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV21A0A0B4J279 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRAV21A0A0B4J279 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRAV21A0A0B4J279 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV21A0A0B4J279 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV21A0A0B4J279 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV21A0A0B4J279 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms