Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV12-3A0A0B4J271 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV12-3A0A0B4J271 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV12-3A0A0B4J271 CPT2-209ENST00000636935 803 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV12-3A0A0B4J271 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRAV12-3A0A0B4J271 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV12-3A0A0B4J271 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
TRAV12-3A0A0B4J271 AP004607.4-201ENST00000530158 1459 ntBASIC15.31■□□□□ 0.04
TRAV12-3A0A0B4J271 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRAV12-3A0A0B4J271 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV12-3A0A0B4J271 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRAV12-3A0A0B4J271 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV12-3A0A0B4J271 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV12-3A0A0B4J271 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRAV12-3A0A0B4J271 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV12-3A0A0B4J271 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 FEM1AP1-201ENST00000431297 1995 ntBASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 ERF-202ENST00000440177 2032 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 LINC01521-201ENST00000504184 1943 ntBASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 KRT87P-202ENST00000534226 1464 ntBASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 AC008175.2-201ENST00000612840 297 ntBASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 AC073130.3-201ENST00000624389 2278 ntBASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRAV12-3A0A0B4J271 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRAV12-3A0A0B4J271 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV12-3A0A0B4J271 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV12-3A0A0B4J271 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV12-3A0A0B4J271 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
TRAV12-3A0A0B4J271 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRAV12-3A0A0B4J271 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV12-3A0A0B4J271 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV12-3A0A0B4J271 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRAV12-3A0A0B4J271 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV12-3A0A0B4J271 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV12-3A0A0B4J271 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRAV12-3A0A0B4J271 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRAV12-3A0A0B4J271 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRAV12-3A0A0B4J271 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV12-3A0A0B4J271 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV12-3A0A0B4J271 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV12-3A0A0B4J271 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRAV12-3A0A0B4J271 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV12-3A0A0B4J271 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV12-3A0A0B4J271 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV12-3A0A0B4J271 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV12-3A0A0B4J271 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRAV12-3A0A0B4J271 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRAV12-3A0A0B4J271 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRAV12-3A0A0B4J271 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 MIR638-201ENST00000385237 100 ntBASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV12-3A0A0B4J271 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
TRAV12-3A0A0B4J271 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV12-3A0A0B4J271 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
TRAV12-3A0A0B4J271 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
TRAV12-3A0A0B4J271 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms