Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 AC136469.2-201ENST00000623944 1028 ntBASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-1A0A0B4J241 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV13-1A0A0B4J241 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
TRAV13-1A0A0B4J241 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV13-1A0A0B4J241 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV13-1A0A0B4J241 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV13-1A0A0B4J241 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 AP005212.1-201ENST00000581547 1997 ntBASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 AL512631.2-201ENST00000604634 923 ntBASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 STX5-203ENST00000394690 1568 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV13-1A0A0B4J241 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 ERF-202ENST00000440177 2032 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 BCL2-203ENST00000589955 5011 ntBASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 AC121338.2-201ENST00000622535 1744 ntBASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TRAV13-1A0A0B4J241 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-1A0A0B4J241 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-1A0A0B4J241 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-1A0A0B4J241 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-1A0A0B4J241 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-1A0A0B4J241 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-1A0A0B4J241 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-1A0A0B4J241 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-1A0A0B4J241 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-1A0A0B4J241 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-1A0A0B4J241 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-1A0A0B4J241 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-1A0A0B4J241 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-1A0A0B4J241 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC14.31□□□□□ -0.12
TRAV13-1A0A0B4J241 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-1A0A0B4J241 AC011298.3-201ENST00000615796 283 ntBASIC14.31□□□□□ -0.12
TRAV13-1A0A0B4J241 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms